Package: BGGM 2.1.3
BGGM: Bayesian Gaussian Graphical Models
Fit Bayesian Gaussian graphical models. The methods are separated into two Bayesian approaches for inference: hypothesis testing and estimation. There are extensions for confirmatory hypothesis testing, comparing Gaussian graphical models, and node wise predictability. These methods were recently introduced in the Gaussian graphical model literature, including Williams (2019) <doi:10.31234/osf.io/x8dpr>, Williams and Mulder (2019) <doi:10.31234/osf.io/ypxd8>, Williams, Rast, Pericchi, and Mulder (2019) <doi:10.31234/osf.io/yt386>.
Authors:
BGGM_2.1.3.tar.gz
BGGM_2.1.3.tar.gz(r-4.5-noble)BGGM_2.1.3.tar.gz(r-4.4-noble)
BGGM_2.1.3.tgz(r-4.4-emscripten)BGGM_2.1.3.tgz(r-4.3-emscripten)
BGGM.pdf |BGGM.html✨
BGGM/json (API)
NEWS
# Install 'BGGM' in R: |
install.packages('BGGM', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/donaldrwilliams/bggm/issues
- Sachs - Data: Sachs Network
- asd_ocd - Data: Autism and Obssesive Compulsive Disorder
- bfi - Data: 25 Personality items representing 5 factors
- csws - Data: Contingencies of Self-Worth Scale
- depression_anxiety_t1 - Data: Depression and Anxiety
- depression_anxiety_t2 - Data: Depression and Anxiety
- gss - Data: 1994 General Social Survey
- ifit - Data: ifit Intensive Longitudinal Data
- iri - Data: Interpersonal Reactivity Index
- ptsd - Data: Post-Traumatic Stress Disorder
- ptsd_cor1 - Data: Post-Traumatic Stress Disorder
- ptsd_cor2 - Data: Post-Traumatic Stress Disorder
- ptsd_cor3 - Data: Post-Traumatic Stress Disorder
- ptsd_cor4 - Data: Post-Traumatic Stress Disorder
- rsa - Data: Resilience Scale of Adults
- tas - Data: Toronto Alexithymia Scale
- women_math - Data: Women and Mathematics
Last updated 5 months agofrom:701b94f80a. Checks:OK: 2. Indexed: no.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Dec 03 2024 |
R-4.5-linux-x86_64 | OK | Dec 03 2024 |
Exports:bggm_missingconfirmconstrained_posteriorconvergenceestimateexplorefisher_r_to_zfisher_z_to_rgen_netgen_ordinalggm_compare_confirmggm_compare_estimateggm_compare_exploreggm_compare_ppcimpute_datamappcor_matpcor_sumpcor_to_corplot_priorposterior_predictposterior_samplesprecisionpredictabilitypredicted_probabilityprior_belief_ggmprior_belief_varregression_summaryroll_your_ownselectvar_estimateweighted_adj_matzero_order_cors
Dependencies:bainBergmBFpackBHbootcachemclicodacolorspacecpp11crayonDEoptimRdplyrergmevaluateextraDistrfansifarverfastmapforcatsgenericsGGallyggplot2ggridgesggstatsgluegslgtablehighrhmsisobandknitrlabelinglatticelavaanlifecyclelme4lpSolveAPImagrittrMASSMatrixmatrixcalcMatrixModelsmcmcMCMCpackmemoisemgcvminqamnormtmunsellmvnfastmvtnormnetworknlmenloptrnumDerivpatchworkpbivnormpillarpkgconfigplyrpracmaprettyunitsprogresspurrrQRMquadprogquantregR6rbibutilsRColorBrewerRcppRcppArmadilloRcppDistRcppEigenRcppProgressRdpackreshapeRglpkrlangrlerobustbasesandwichscalesslamsnaSparseMstatnet.commonstringistringrsurvivaltibbletidyrtidyselecttimeDatetimeSeriestrustutf8vctrsviridisLitewithrxfunyamlzoo
Controlling for Variables
Rendered fromcontrol.Rmd
usingknitr::rmarkdown
on Dec 03 2024.Last update: 2020-07-23
Started: 2020-05-31
Custom Network Comparisons
Rendered fromppc_custom.Rmd
usingknitr::rmarkdown
on Dec 03 2024.Last update: 2020-05-31
Started: 2020-05-31
Custom Network Statistics
Rendered fromnetstat_custom.Rmd
usingknitr::rmarkdown
on Dec 03 2024.Last update: 2020-05-31
Started: 2020-05-31
Graphical VAR
Rendered fromvar_model.Rmd
usingknitr::rmarkdown
on Dec 03 2024.Last update: 2020-07-23
Started: 2020-07-23
In Tandem: Confirmatory and Exploratory Testing
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usingknitr::rmarkdown
on Dec 03 2024.Last update: 2024-02-24
Started: 2020-05-31
MCMC Diagnostics
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usingknitr::rmarkdown
on Dec 03 2024.Last update: 2024-02-24
Started: 2020-05-31
Network Plots
Rendered fromnetplot.Rmd
usingknitr::rmarkdown
on Dec 03 2024.Last update: 2021-08-20
Started: 2020-05-31
Predictability: Binary, Ordinal, and Continuous
Rendered frompredictability.Rmd
usingknitr::rmarkdown
on Dec 03 2024.Last update: 2020-05-31
Started: 2020-05-31
Testing Sums
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usingknitr::rmarkdown
on Dec 03 2024.Last update: 2020-05-31
Started: 2020-05-31
Three Ways to Test the Same Hypothesis
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usingknitr::rmarkdown
on Dec 03 2024.Last update: 2020-05-31
Started: 2020-05-31
Troubleshoot
Rendered frominstallation.Rmd
usingknitr::rmarkdown
on Dec 03 2024.Last update: 2024-02-24
Started: 2020-05-31