Package: BAT 2.9.6
Pedro Cardoso
BAT: Biodiversity Assessment Tools
Includes algorithms to assess alpha and beta diversity in all their dimensions (taxonomic, phylogenetic and functional). It allows performing a number of analyses based on species identities/abundances, phylogenetic/functional distances, trees, convex-hulls or kernel density n-dimensional hypervolumes depicting species relationships. Cardoso et al. (2015) <doi:10.1111/2041-210X.12310>.
Authors:
BAT_2.9.6.tar.gz
BAT_2.9.6.tar.gz(r-4.5-noble)BAT_2.9.6.tar.gz(r-4.4-noble)
BAT_2.9.6.tgz(r-4.4-emscripten)BAT_2.9.6.tgz(r-4.3-emscripten)
BAT.pdf |BAT.html✨
BAT/json (API)
# Install 'BAT' in R: |
install.packages('BAT', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 10 months agofrom:d43ab82395. Checks:OK: 2. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Dec 14 2024 |
R-4.5-linux | OK | Dec 14 2024 |
Exports:accuracyaicalphaalpha.accumalpha.estimatebetabeta.accumbeta.evennessbeta.multicontributioncoveragecwdcwecwmdispersiondummyevennessevenness.contributionfillgammagdmgowerhillhull.alphahull.betahull.buildhull.contributionhull.gammahull.sadhyper.buildhyper.qualityiaorkernel.alphakernel.betakernel.beta.evennesskernel.buildkernel.contributionkernel.dispersionkernel.evennesskernel.evenness.contributionkernel.gammakernel.hotspotskernel.originalitykernel.sadkernel.similaritylinneanmixtureoptim.alphaoptim.alpha.statsoptim.betaoptim.beta.statsoptim.spatialoriginalityr2raoraster.alpharaster.betaraster.dispersionraster.evennesssadsarsessim.plotsim.sadsim.samplesim.spatialsim.treeslopestandardtree.buildtree.qualitytree.zerouniqueness
Dependencies:abindapecaretclasscliclockclusterclusterGenerationcodacodetoolscolorspacecombinatcpp11crayondata.tableDEoptimdiagramdigestdoParalleldplyre1071expmfansifarverfastclusterfastmatchFNNforeachfuturefuture.applygenericsgeometryggplot2globalsgluegowergtablehardhathitandrunhmshypervolumeigraphipredisobanditeratorskernlabKernSmoothkslabelinglatticelavalifecyclelinproglistenvlpSolvelubridatemagicmagrittrmapsMASSMatrixmclustmgcvmnormtModelMetricsmulticoolmunsellmvtnormnlmenls2nnetnumDerivoptimParallelpalmerpenguinsparallellypbapplypdistpermutephangornphytoolspillarpkgconfigplyrpracmaprettyunitspROCprodlimprogressprogressrprotoproxypurrrquadprogR6rasterrcddRColorBrewerRcppRcppArmadilloRcppProgressrecipesreshape2rlangrpartscalesscatterplot3dshapespSQUAREMstringistringrsurvivalterratibbletidyrtidyselecttimechangetimeDatetzdbutf8vctrsveganviridisLitewithr