Package: AdmixPoly 1.0.0

Simon Rio

AdmixPoly: Global and Local Admixture Inference in Polyploids

Provides functions to perform global (genome-wide) and local admixture inference from bi- and multi-allelic marker dosages (discrete or continuous) in polyploid species.

Authors:Simon Rio [aut, cre], Tristan Mary-Huard [aut], Franck Gauthier [aut]

AdmixPoly_1.0.0.tar.gz
AdmixPoly_1.0.0.tar.gz(r-4.7-arm64)AdmixPoly_1.0.0.tar.gz(r-4.7-x86_64)AdmixPoly_1.0.0.tar.gz(r-4.6-arm64)AdmixPoly_1.0.0.tar.gz(r-4.6-x86_64)
manual.pdf |manual.html✨
card.svg |card.png
AdmixPoly/json (API)

# Install 'AdmixPoly' in R:
install.packages('AdmixPoly', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))
Uses libs:
  • openblas– Optimized BLAS
  • c++– GNU Standard C++ Library v3
  • openmp– GCC OpenMP (GOMP) support library

On CRAN:

Conda:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

openblascppopenmp

2.70 score 7 exports 34 dependencies

Last updated from:bf647eb5dd. Checks:5 OK, 1 FAIL. Indexed: no.

TargetResultTimeFilesSyslog
linux-devel-arm64OK195
linux-devel-x86_64OK177
source / vignettesOK257
linux-release-arm64OK212
linux-release-x86_64OK195
wasm-releaseFAIL115

Exports:AdmixGlobalAdmixLocalGlobalPlotLocalPlotReadHPAReadVCFSimulatePop

Dependencies:clicpp11data.tabledplyrfarvergenericsggplot2gluegtableisobandlabelinglatticelifecyclemagrittrMatrixpillarpkgconfigpurrrR6RColorBrewerRcppRcppArmadillorlangS7scalesstringistringrtibbletidyrtidyselectutf8vctrsviridisLitewithr

AdmixPoly-vignette

Simon Rio

Rendered fromAdmixPoly-vignette.Rmdusingknitr::rmarkdownon Jun 08 2026.

Last update: 2026-06-08
Started: 2026-06-08