Package: file2meco 0.8.0
Chi Liu
file2meco:Transform Files to 'microtable' Object with 'microeco' Package
Transform output files of some tools to the 'microtable' object of 'microtable' class in 'microeco' package. The 'microtable' class is the basic class in 'microeco' package and is necessary for the downstream microbial community data analysis.
Authors:
file2meco_0.8.0.tar.gz
file2meco_0.8.0.tar.gz(r-4.5-noble)file2meco_0.8.0.tar.gz(r-4.4-noble)
file2meco_0.8.0.tgz(r-4.4-emscripten)file2meco_0.8.0.tgz(r-4.3-emscripten)
file2meco.pdf |file2meco.html✨
file2meco/json (API)
| # Installfile2meco in R: |
| install.packages('file2meco',repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/chiliubio/file2meco/issues
- CHOCOPhlAn_taxonomy - The CHOCOPhlAn_taxonomy data
- MetaCyc_pathway_map - The MetaCyc_pathway_map data
- ncyc_map - The ncyc_map data
- pcyc_map - The pcyc_map data
Last updated 5 days agofrom:03bffb1ab4
Exports:humann2mecomeco2phyloseqmeco2tsemetacyc_pathway_websitempa2meconcyc2mecophyloseq2mecoqiime1mecoqiime2mecotse2mecovs2meco
Dependencies:apecliclustercolorspacecpp11data.tabledigestdplyrfansifarvergenericsggplot2gluegtableigraphisobandlabelinglatticelifecyclemagrittrMASSMatrixmgcvmicroecomunsellnlmepermutepillarpkgconfigplyrpurrrR6RColorBrewerRcppreshape2rhdf5rhdf5filtersRhdf5librlangscalesstringistringrtibbletidyrtidyselectutf8vctrsveganviridisLitewithryaml
