Package: SPARTAAS 1.2.4

Arthur Coulon

SPARTAAS:Statistical Pattern Recognition and daTing using Archaeological Artefacts assemblageS

Statistical pattern recognition and dating using archaeological artefacts assemblages. Package of statistical tools for archaeology. hclustcompro()/perioclust(): Bellanger Lise, Coulon Arthur, Husi Philippe (2021, ISBN:978-3-030-60103-4). mapclust(): Bellanger Lise, Coulon Arthur, Husi Philippe (2021) <doi:10.1016/j.jas.2021.105431>. seriograph(): Desachy Bruno (2004) <doi:10.3406/pica.2004.2396>. cerardat(): Bellanger Lise, Husi Philippe (2012) <doi:10.1016/j.jas.2011.06.031>.

Authors:Arthur Coulon [aut, cre], Lise Bellanger [aut], Philippe Husi [aut], Bruno Desachy [ctb], Benjamin Martineau [ctb]

SPARTAAS_1.2.4.tar.gz
SPARTAAS_1.2.4.tar.gz(r-4.5-noble)SPARTAAS_1.2.4.tar.gz(r-4.4-noble)
SPARTAAS_1.2.4.tgz(r-4.4-emscripten)SPARTAAS_1.2.4.tgz(r-4.3-emscripten)
SPARTAAS.pdf |SPARTAAS.html✨
SPARTAAS/json (API)

# InstallSPARTAAS in R:

install.packages('SPARTAAS',repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

Datasets:

datacancer - Data set of cancerology.
dataceram - Data set of archeology
datacerardat - Data set of archaeology.
datangkor - Data set of archeology
datarcheo - Data set of archeology

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

20 exports 0.09 score 153 dependencies 137 downloads

Last updated 8 days agofrom:5e7ccabecb

Exports:adjacency arrondi CAdist cerardat cerardat_app cerardat_estim_nf extract_results hclust hclustcompro hclustcompro_app hclustcompro_select_alpha hclustcompro_subdivide mapclust mapclust_app mapclust_cut_tree overlap perioclust serio_app seriograph timerange

Dependencies:abind ade4 anytime ape askpass backports base64enc BH boot broom bslib cachem car carData class cli cluster colorspace commonmark cowplot cpp11 crayon crosstalk curl data.table DEoptimR Deriv digest diptest doBy dplyr DT ellipse emmeans estimability evaluate explor FactoMineR fansi farver fastcluster fastmap flashClust flexmix FNN fontawesome foreign formatR fpc fs generics ggdendro ggplot2 ggrepel glue gtable highr htmltools htmlwidgets httpuv httr isoband jquerylib jsonlite kernlab KernSmooth knitr ks labeling later lattice lazyeval leaflet leaflet.providers leaps lifecycle lme4 lmtest magrittr MASS Matrix MatrixModels mclust memoise mgcv microbenchmark mime minqa modelr modeltools multcompView multicool munsell mvtnorm nlme nloptr nnet nor1mix numDeriv openssl pbkrtest pillar pixmap pkgconfig plotly png prabclus pracma promises purrr quantreg R6 rappdirs raster RColorBrewer Rcpp RcppArmadillo RcppEigen rlang rmarkdown robustbase rstudioapi sass scales scatterD3 scatterplot3d shiny shinycssloaders shinydashboard shinyjqui shinyjs shinythemes shinyWidgets sourcetools sp SparseM stringi stringr survival sys terra tibble tidyr tidyselect tinytex utf8 vctrs viridisLite withr xfun xtable yaml zoo

Help page	Topics
SPARTAAS	SPARTAAS-package SPARTAAS
Dissimilarity matrix based on connectivity information.	adjacency
Returns the rounded value.	arrondi
Distance matrix based on correspondence analysis results	CAdist
cerardat	cerardat
Launch the shiny application.	cerardat_app
Number of axes to keep	cerardat_estim_nf
Data set of cancerology.	datacancer
Data set of archeology	dataceram
Data set of archaeology.	datacerardat
Data set of archeology	datangkor
Data set of archeology	datarcheo
Generates all plots (in jpeg format) in a subfolder	extract_results
Hierarchical clustering of up to two datasets (Compromised clustering).	hclust
hclustcompro	hclustcompro perioclust
Launch the shiny application.	hclustcompro_app
Estimate the optimal value(s) of the alpha parameter.	hclustcompro_select_alpha
Subdivide a cluster after running hclustcompro.	hclustcompro_subdivide
Divise hierarchical Clustering using Spatialpatches algorithm.	mapclust
Shiny application for Mapclust method	mapclust_app
Function to cut the dendrogram for a new height (distance limit) or a new number of clusters and map the new partition	mapclust_cut_tree
Temporal overlap index	overlap
plot cerardat model	plot.cerardat_obj
Launch the shiny application.	serio_app
Plot seriograph (B. DESACHY).	seriograph
Plot the time range of observations sorted by cluster.	timerange

Package: SPARTAAS 1.2.4

SPARTAAS:Statistical Pattern Recognition and daTing using Archaeological Artefacts assemblageS

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Readme and manuals

Help Manual

Usage by other packages (reverse dependencies)