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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "transitiontrees" in publications use:'
type: software
license: GPL-3.0-only
title: 'transitiontrees: Transition Trajectories and Dynamics of Variable-Length Pathways
  or Sequences'
version: 0.1.2
abstract: Analyzes transition trajectories in event, sequence, and ordered data, focusing
  on how states follow one another, how far processes unfold, and where pathways branch
  or converge. Trajectories are modeled using variable-order prediction suffix trees
  (Ron, Singer, & Tishby, 1996) <https://doi.org/10.1023/A:1026490906255>, implemented
  in both frequency-based and prediction-based forms. The framework includes multiple
  pruning, validation, and smoothing techniques to ensure model robustness. Visualization
  options include transition trees, radial sunburst diagrams, transition heatmaps,
  and forward trajectory trees.
authors:
- family-names: Saqr
  given-names: Mohammed
  email: saqr@saqr.me
- family-names: López-Pernas
  given-names: Sonsoles
  email: sonsoles.lopez@uef.fi
repository: https://cran.r-universe.dev
repository-code: https://github.com/mohsaqr/transitiontrees
commit: 037bd79833b65d3fa7fc936bdb0411a946a46dbb
url: https://github.com/mohsaqr/transitiontrees
date-released: '2026-06-18'
contact:
- family-names: Saqr
  given-names: Mohammed
  email: saqr@saqr.me