Edit reference in DESCRIPTION file
Add url links to all documentation Synchronize and test with Travis
Synchronize package with Git
Revise examples to limit data file size Update documentation of data files
Compress data files Add donttest{} statements to long examples
Update terminology of sclerochronological elements
Add documentation for new data files Check building of model and debug
Add examples to all executable functions Add data files to allow running of examples
Rebuild package with updated functions Revise and test all Rd files Revise NAMESPACE Test functions
Test and debug "Oyster_phase_run" and "Oyster_combined_run" Update Rd description files Update Data files to work with new functions
Debug "Oyster_run_secX" functions to streamline total model running and link functions and output Decompose "Oyster_log" function for use in aggregate functions
Debug "Oyster_run_secX" functions to streamline total model running and link functions and output Decompose "Oyster_log" function for use in aggregate functions
Debug "Oyster_run_secX" functions to streamline total model running and link functions and output Decompose "Oyster_log" function for use in aggregate functions
Debug "Oyster_suby_phases" function Finalize "Oyster_Mass_gain" function to wrap up growth model Build plotting function into "Oyster_accumulation" step to increase user feedback
Fine-tune and test BMP and TIFF import functions Test and finalize parameterization of phase maps ("Oyster_phase_matrix_BMP" and "Oyster_phase_matrix_TIF")
Move "Oyster_Mass_gain" function to phase model Add heatmap plotting to "Oyster_Z_matrices" function to provide in-model user feedback Test, finalize and automate "Oyster_growth_model" function
Update input file specifics to allow parsing of shell growth time (days) Update names of parameters to refer to "(sub)increments" instead of "years"
Revise model mechanics to include seasonal variation in growth rates (most notably function: "Oyster_Increment_cross_section") Revise model to include growth stops Revise model to allow variable density through shell
Updated personal website URL Updated date in DESCRIPTION Updated dataset Rd files First submission to CRAN
Create README and NEWS files Update DESCRIPTION file
Edited line breaks in documentation files
Deleded non-ASCII characters from all documentation files Edites examples to refer to paper in review Write cran-comments.md
Updated CITATION file to fit the correct format Run checks
Create description files Update data files and descriptions Run tests with data files
Create first version of package from R code