Package: seam
Title: Sparse Extended Analysis of Modules
Version: 0.1.0
Maintainer: Marketa Barac Makarova <marketa.makarova@mail.muni.cz>
Authors@R: c(person(given = c("Marketa", "Barac"),
                      family = "Makarova",
                      role = c("aut", "cre"),
                      email = "marketa.makarova@mail.muni.cz"),
               person(given = "Jan",
                      family = "Kolacek",
                      role = "ctb"))
Description: Provides tools for comparing groups using sparse principal
        component analysis (SPCA). Includes functions for identifying
        and visualizing influential variables, assessing variable
        selection stability through bootstrapping, and exploring
        associations with clinical traits. SPCA is implemented using
        the method described in <doi:10.1198/106186006X113430>.
License: MIT + file LICENSE
Encoding: UTF-8
Depends: R (>= 4.1.0)
Imports: dplyr, elasticnet, ggplot2, graphics, rlang, stats, tidyr
Suggests: spelling, testthat (>= 3.0.0)
Config/testthat/edition: 3
NeedsCompilation: no
Packaged: 2026-11-07 22:36:46 UTC; root
Author: Marketa Barac Makarova [aut, cre], Jan Kolacek [ctb]
URL: https://github.com/marketa-makarova/seam
BugReports: https://github.com/marketa-makarova/seam/issues
Config/roxygen2/version: 8.1.0
Language: en-US
Repository: https://cran.r-universe.dev
Date/Publication: 2026-11-07 21:01:42 UTC
RemoteUrl: https://github.com/cran/seam
RemoteRef: HEAD
RemoteSha: f59c58c4dc16ef951d021c1c7c2a536df2e7a173