To cite rtransparency in publications, please cite both the package and
the foundational validation paper:

  Serghiou S, Sofi-Mahmudi A (2026). _rtransparency: Identify
  Indicators of Transparency in the Biomedical Literature_. R package
  version 1.0.0, <https://github.com/choxos/rtransparency>.

A BibTeX entry for LaTeX users is

  @Manual{,
    title = {{rtransparency}: Identify Indicators of Transparency in the Biomedical Literature},
    author = {Stylianos Serghiou and Ahmad Sofi-Mahmudi},
    year = {2026},
    note = {R package version 1.0.0},
    url = {https://github.com/choxos/rtransparency},
  }

  Serghiou S, Contopoulos-Ioannidis D, Boyack K, Riedel N, Wallach J,
  Ioannidis J (2021). “Assessment of transparency indicators across the
  biomedical literature: How open is open?” _PLOS Biology_, *19*(3),
  e3001107. doi:10.1371/journal.pbio.3001107
  <https://doi.org/10.1371/journal.pbio.3001107>.

A BibTeX entry for LaTeX users is

  @Article{,
    title = {Assessment of transparency indicators across the biomedical literature: How open is open?},
    author = {Stylianos Serghiou and Despina G. Contopoulos-Ioannidis and Kevin W. Boyack and Nico Riedel and Joshua D. Wallach and John P. A. Ioannidis},
    journal = {PLOS Biology},
    year = {2021},
    volume = {19},
    number = {3},
    pages = {e3001107},
    doi = {10.1371/journal.pbio.3001107},
  }