--- title: "Available landscape targets" output: pdf_document vignette: > %\VignetteIndexEntry{Available landscape targets} %\VignetteEngine{knitr::rmarkdown_notangle} --- | Name | Abbreviation | Level | Unit | | ----------------------------------------|--------------------------| --------|--------------------------| | [Patch area](#AREA) | AREA | class | cell surfaces | | [Mean patch area](#AREA_MN) | AREA_MN | class | cell surfaces | | [Total class area](#CA) | CA | class | cell surfaces | | [Proportion of landscape](#PLAND) | PLAND / NON_FOCAL_PLAND | class | percentage | | [Number of patches](#NP) | NP | class | unitless | | [Patch density](#PD) | PD | class | patches per cell surface | | [Smallest patch index](#SPI) | SPI | class | cell surfaces | | [Largest patch index](#LPI) | LPI | class | cell surfaces | | [Effective mesh size](#MESH) | MESH | class | cell surfaces | | [Splitting index](#SPLI) | SPLI | class | unitless | | [Net product](#NPRO) | NPRO | class | (cell surfaces)^2 | | [Splitting density](#SDEN) | SDEN | class | (cell surfaces)^-1 | | [Degree of coherence](#COHE) | COHE | class | probability (in [0, 1]) | | [Degree of landscape division](#DIVI) | DIVI | class | probability (in [0, 1]) | | [Force square patches](#IS_SQUARE) | IS_SQUARE | class | true of false | | [Force different areas](#ALL_DIFFERENT) | ALL_DIFFERENT | class | true of false | - **`AREA` : Patch area ** Interval that defines the minimum and maximum allowed area for all patches of the landscape class. - **`AREA_MN` : Mean patch area ** Interval that defines the minimum and maximum allowed mean patch area for the landscape class. - **`CA` : Total class area ** Interval that defines the minimum and maximum allowed total area of the landscape class. - **`PLAND` and `NON_FOCAL_PLAND`: Proportion of landscape ** Interval that defines the minimum and maximum allowed proportion of landscape occupied by the landscape class. `NON_FOCAL_PLAND` is used to enforce a PLAND target on the non-focal class, and is defined at the landscape level. - **`NP` : Number of patches ** Interval that defines the minimum and maximum allowed number of patches in the landscape class. - **`PD` : Patch density ** Interval that defines the minimum and maximum allowed patch density of the landscape class. Patch density is given by: $$PD = \frac{NP}{L}$$ With NP the number of patches and L the landscape area. - **`SPI` : Smallest patch index ** Interval that defines the minimum and maximum allowed size for the smallest patch of the landscape class. - **`LPI` : Largest patch index ** Interval that defines the minimum and maximum allowed size for the largest patch of the landscape class. - **`MESH` : Effective mesh size ** Interval that defines the minimum and maximum allowed effective mesh size. The effective mesh size is a fragmentation index based on the probability that two points that are randomly chosen are located in the main patch (Jaeger, 2000). It is given by: $$MESH = \frac{1}{L} \sum_{i=1}^{NP} A_i^2$$ With L the total landscape area, NP the number of patches in the landscape class, and $A_i$ the area of patch $i$. - **`SPLI` : Splitting index ** Interval that defines the minimum and maximum allowed splitting index. The splitting index was defined by Jaeger (2000) and is given by: $$ SPLI = \frac{L^2}{\sum_{i=1}^{NP} A_i^2} $$ With L the total landscape area, NP the number of patches, and $A_i$ the area of patch i. - **`NPRO` : Net product ** Interval that defines the minimum and maximum allowed net product. The net product was defined by Jaeger (2000) and is given by: $$ NPRO = \sum_{i=1}^{NP} A_i^2 $$ Where NP is the number of patches of the landscape class and $A_i$ the area of patch i. - **`SDEN` : Splitting density ** Interval that defines the minimum and maximum allowed splitting density. The splitting density was defined by Jaeger (2000) and is given by: $$ SDEN = \frac{L}{\sum_{i=1}^{NP} A_i^2} $$ With L the total landscape area, NP the number of patches, and $A_i$ the area of patch i. - **`COHE` : Degree of coherence ** Interval that defines the minimum and maximum allowed degree of coherence. The degree of coherence was defined by Jaeger (2000) and is given by: $$ COHE = \sum_{i=1}^{NP}(\frac{A_i}{L})^2 $$ With L the total landscape area, NP the number of patches, and $A_i$ the area of patch i. - **`DIVI` : Degree of landscape division ** Interval that defines the minimum and maximum allowed degree of landscape division. The degree of landscape division was defined by Jaeger (2000) and is given by: $$ DIVI = 1 - \sum_{i=1}^{NP}(\frac{A_i}{L})^2 $$ With L the total landscape area, NP the number of patches, and $A_i$ the area of patch i. - **`IS_SQUARE` : Force all patches to be square ** This target forces rflsgen to produce only patches that areperfect squares. Note that this restricts the range of possible areas, as patches areas must be in the form $A_i = w * w$, where $w$ is the width of a perfect square. - **`ALL_DIFFERENT` : Force patches to have different areas ** This target forces rflsgen to produce patches that all have a different area. #### References Jaeger, J. A. G. (2000). Landscape division, splitting index, and effective mesh size: New measures of landscape fragmentation. Landscape Ecology, 15(2), 115-130. https://doi.org/10.1023/A:1008129329289