Package: prototest
Type: Package
Title: Inference on Prototypes from Clusters of Features
Version: 1.3
Date: 2026-09-17
Authors@R: person(given = "Stephen",
                      family = "Reid",
                      role = c("aut", "cre"),
                      email = "sreid1652@gmail.com")
Depends: intervals, MASS, glmnet
Description: Procedures for testing for group-wide signal in clusters
        of variables. Tests can be performed for single groups in
        isolation (univariate) or multiple groups together
        (multivariate). Specific tests include the exact and
        approximate (un)selective likelihood ratio tests described in
        Reid et al (2015), the selective F test and marginal screening
        prototype test of Reid and Tibshirani (2015). User may
        pre-specify columns to be included in prototype formation, or
        allow the function to select them itself. A mixture of these
        two is also possible. Any variable selection is accounted for
        using the selective inference framework. Options for
        non-sampling and hit-and-run null reference distributions.
License: GPL (>= 2)
Imports: Rcpp (>= 0.12.1)
LinkingTo: Rcpp, RcppArmadillo
URL: https://arxiv.org/abs/1511.07839
Config/roxygen2/version: 8.1.0
NeedsCompilation: yes
Packaged: 2026-09-18 11:40:29 UTC; root
Author: Stephen Reid [aut, cre]
Maintainer: Stephen Reid <sreid1652@gmail.com>
Repository: https://cran.r-universe.dev
Date/Publication: 2026-09-18 06:00:02 UTC
RemoteUrl: https://github.com/cran/prototest
RemoteRef: HEAD
RemoteSha: 5a6472869ffbfe20e15f7759406de462d140f269