To cite package ‘phyr’ in publications use:

Ives A, Dinnage R, Nell LA, Helmus M, Li D (2025). phyr: Model Based Phylogenetic Analysis. R package version 1.1.3, https://CRAN.R-project.org/package=phyr.

Corresponding BibTeX entry:

  @Manual{,
    title = {phyr: Model Based Phylogenetic Analysis},
    author = {Anthony Ives and Russell Dinnage and Lucas A. Nell and
      Matthew Helmus and Daijiang Li},
    year = {2025},
    note = {R package version 1.1.3},
    url = {https://CRAN.R-project.org/package=phyr},
  }