# ------------------------------------------------
# CITATION.cff file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
# ------------------------------------------------
 
cff-version: 1.2.0
message: 'To cite package "phylorug" in publications use:'
type: software
license: MIT
title: 'phylorug: Visualize Clade Recovery and Support Across Phylogenetic Trees'
version: 0.1.0
abstract: Generates rug plot visualizations directly on tree nodes to illustrate clade
  recovery and support from multiple phylogenetic and phylogenomic analyses. As modern
  studies routinely employ diverse datasets and inference techniques producing potentially
  conflicting trees, 'phylorug' simplifies the comparison among these trees by consolidating
  clade recovery and support on a reference tree.
authors:
- family-names: Ahamed
  given-names: Md Rifath
  email: rifathahamed777@gmail.com
  orcid: https://orcid.org/0009-0005-6158-8658
- family-names: Arias
  given-names: J. Salvador
  email: js.arias@conicet.gov.ar
  orcid: https://orcid.org/0000-0002-3717-435X
- family-names: Tarasov
  given-names: Sergei
  email: sergei.tarasov@helsinki.fi
  orcid: https://orcid.org/0000-0002-1737-9403
preferred-citation:
  type: manual
  title: 'phylorug: Visualize Clade Recovery and Support Across Phylogenetic Trees'
  authors:
  - family-names: Ahamed
    given-names: Md Rifath
    email: rifathahamed777@gmail.com
    orcid: https://orcid.org/0009-0005-6158-8658
  - family-names: Arias
    given-names: J. Salvador
    email: js.arias@conicet.gov.ar
    orcid: https://orcid.org/0000-0002-3717-435X
  - family-names: Tarasov
    given-names: Sergei
    email: sergei.tarasov@helsinki.fi
    orcid: https://orcid.org/0000-0002-1737-9403
  year: '2026'
  notes: R package version 0.1.0
  url: https://github.com/mdrifathahamed/phylorug
repository: https://cran.r-universe.dev
repository-code: https://github.com/mdrifathahamed/phylorug
commit: cbfe1c4c71aa04ed324572dc095e783845f72eca
url: https://mdrifathahamed.github.io/phylorug/
date-released: '2026-11-06'
contact:
- family-names: Ahamed
  given-names: Md Rifath
  email: rifathahamed777@gmail.com
  orcid: https://orcid.org/0009-0005-6158-8658