Package: pcmabc
Type: Package
Title: Approximate Bayesian Computations for Phylogenetic Comparative
        Methods
Version: 1.1.3
Date: 2022-05-06
Author: Krzysztof Bartoszek <krzbar@protonmail.ch>, Pietro Lio'
Maintainer: Krzysztof Bartoszek <krzbar@protonmail.ch>
Description: Fits by ABC, the parameters of a stochastic process
        modelling the phylogeny and evolution of a suite of traits
        following the tree. The user may define an arbitrary Markov
        process for the trait and phylogeny. Importantly,
        trait-dependent speciation models are handled and fitted to
        data. See K. Bartoszek, P. Lio' (2019)
        <doi:10.5506/APhysPolBSupp.12.25>. The suggested geiger package
        can be obtained from CRAN's archive
        <https://cran.r-project.org/src/contrib/Archive/geiger/>,
        suggested to take latest version. Otherwise its required code
        is present in the pcmabc package. The suggested distory package
        can be obtained from CRAN's archive
        <https://cran.r-project.org/src/contrib/Archive/distory/>,
        suggested to take latest version.
Depends: R(>= 2.9.1)
Imports: ape (>= 3.0.6), graphics, methods, mvSLOUCH, phangorn, stats,
        utils, yuima
Suggests: geiger, distory
License: GPL (>= 2) | file LICENCE
LazyLoad: yes
Collate: ABCdist.R ABCmessage.R ABC.R ABCupdate.R draw.R
        from_geiger_2_0_6_2_diversification.R getTipSample.R rates.R
        simsde.R simtree.R
NeedsCompilation: no
Packaged: 2026-10-13 12:52:06 UTC; root
Repository: https://cran.r-universe.dev
Date/Publication: 2022-05-09 07:40:07 UTC
RemoteUrl: https://github.com/cran/pcmabc
RemoteRef: HEAD
RemoteSha: 8f1a7972b69781ef53ce5f63948a7b32c3e97524