# ------------------------------------------------ # CITATION.cff file created with {cffr} R package # See also: https://docs.ropensci.org/cffr/ # ------------------------------------------------ cff-version: 1.2.0 message: 'To cite package "opentimsr" in publications use:' type: software license: MIT title: 'opentimsr: An Open-Source Loader for Bruker''s timsTOF Data Files' version: 1.2.0 doi: 10.1021/acs.jproteome.0c00962 abstract: Reads raw data from Bruker's timsTOF mass spectrometers, stored in analysis.tdf and analysis.tdf_bin files inside .d folders. Frames can be selected by number or by retention time, and each peak is reported with its scan, time-of-flight index, intensity, mass-to-charge ratio and inverse ion mobility. Mass-to-charge ratios and ion mobilities are computed with built-in open-source calibration, or optionally with Bruker's proprietary library. See Łącki et al. (2021) . authors: - family-names: Startek given-names: Michał Piotr email: michal.startek@mimuw.edu.pl orcid: https://orcid.org/0000-0001-5227-3447 - family-names: Łącki given-names: Mateusz Krzysztof email: matteo.lacki@gmail.com orcid: https://orcid.org/0000-0001-7415-4748 preferred-citation: type: article title: 'OpenTIMS, TimsPy, and TimsR: Open and Easy Access to timsTOF Raw Data' authors: - family-names: Łącki given-names: Mateusz K. - family-names: Startek given-names: Michał P. - family-names: Brehmer given-names: Sven - family-names: Distler given-names: Ute - family-names: Tenzer given-names: Stefan journal: Journal of Proteome Research year: '2021' volume: '20' issue: '4' doi: 10.1021/acs.jproteome.0c00962 start: '2122' end: '2129' repository: https://cran.r-universe.dev repository-code: https://github.com/michalsta/opentims commit: 82141cd2b7dc1e77a85c8c0d1f5620266f90bec6 url: https://github.com/michalsta/opentims date-released: '2026-09-24' contact: - family-names: Łącki given-names: Mateusz Krzysztof email: matteo.lacki@gmail.com orcid: https://orcid.org/0000-0001-7415-4748