# --------------------------------------------
# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
# --------------------------------------------
 
cff-version: 1.2.0
message: 'To cite package "nimbleEcology" in publications use:'
type: software
license: GPL-3.0-only
title: 'nimbleEcology: Distributions for Ecological Models in ''nimble'''
version: 0.5.0
identifiers:
- type: doi
  value: 10.32614/CRAN.package.nimbleEcology
abstract: 'Common ecological distributions for ''nimble'' models in the form of nimbleFunction
  objects. Includes Cormack-Jolly-Seber, occupancy, dynamic occupancy, hidden Markov,
  dynamic hidden Markov, and N-mixture models. (Jolly (1965) <DOI: 10.2307/2333826>,
  Seber (1965) <DOI: 10.2307/2333827>, Turek et al. (2016) <https://doi.org/10.1007/s10651-016-0353-z>).'
authors:
- family-names: Goldstein
  given-names: Benjamin R.
  email: bgoldst2@ncsu.edu
- family-names: Turek
  given-names: Daniel
- family-names: Ponisio
  given-names: Lauren
- family-names: Valpine
  given-names: Perry
  name-particle: de
preferred-citation:
  type: generic
  title: 'nimbleEcology: Distributions for Ecological Models in nimble'
  authors:
  - family-names: Goldstein
    given-names: Benjamin R.
    email: bgoldst2@ncsu.edu
  - family-names: Turek
    given-names: Daniel
  - family-names: Ponisio
    given-names: Lauren
  - family-names: Valpine
    given-names: Perry
    name-particle: de
  url: https://cran.r-project.org/package=nimbleEcology
  year: '2024'
  version: 0.5.0
  notes: R package version 0.5.0
repository: https://CRAN.R-project.org/package=nimbleEcology
repository-code: https://github.com/nimble-dev/nimbleEcology
url: https://github.com/nimble-dev/nimbleEcology
date-released: '2024-06-24'
contact:
- family-names: Goldstein
  given-names: Benjamin R.
  email: bgoldst2@ncsu.edu
references:
- type: article
  title: Efficient Markov chain Monte Carlo sampling for hierarchical hidden Markov
    models
  authors:
  - family-names: Turek
    given-names: D.
  - family-names: Valpine
    given-names: P.
    name-particle: de
  - family-names: Paciorek
    given-names: C.J.
  journal: Environmental and Ecological Statistics
  volume: '23'
  year: '2016'
  doi: 10.1007/s10651-016-0353-z
  start: 549-564
- type: article
  title: 'One size does not fit all: Customizing MCMC methods for hierarchical models
    using NIMBLE'
  authors:
  - family-names: Ponisio
    given-names: L.
  - family-names: Valpine
    given-names: P.
    name-particle: de
  - family-names: Michaud
    given-names: N.
  - family-names: Turek
    given-names: D.
  journal: Ecology and Evolution
  volume: '10'
  year: '2020'
  doi: 10.1002/ece3.6053
  start: 2385–2416
- type: article
  title: Comparing N-mixture Models and GLMMs for Relative Abundance Estimation in
    a Citizen Science Dataset
  authors:
  - family-names: Goldstein
    given-names: B.R.
  - family-names: Valpine
    given-names: P.
    name-particle: de
  journal: Scientific Reports
  volume: '12'
  year: '2022'
  doi: 10.1038/s41598-022-16368-z
  start: '12276'