Package: mmcmcBayes
Type: Package
Title: Multistage MCMC Method for Detecting DMRs
Version: 0.2.0
Authors@R: 
    c(
    person("Zhexuan", "Yang", 
           email = "zky5198@psu.edu", 
           role = c("aut", "cre")),
    person("Duchwan", "Ryu", 
           email = "dryu@niu.edu", 
           role = "aut"),
    person("Feng", "Luan", 
           email = "fluan1@niu.edu", 
           role = "aut")
    )
Description: Implements differential methylation region (DMR) detection
        using a multistage Markov chain Monte Carlo (MCMC) algorithm
        based on the alpha-skew generalized normal (ASGN) distribution.
        Version 0.2.0 removes the Anderson-Darling test stage, improves
        computational efficiency of the core ASGN and multistage MCMC
        routines, and adds convenience functions for summarizing and
        visualizing detected DMRs. The methodology is based on Yang
        (2025) <https://www.proquest.com/docview/3218878972>.
License: GPL-3
URL: https://github.com/zyang1919/mmcmcBayes
BugReports: https://github.com/zyang1919/mmcmcBayes/issues
Depends: R (>= 4.0.0)
Imports: stats, graphics, MCMCpack (>= 1.4-0)
Suggests: kSamples, testthat (>= 3.0.0), knitr, rmarkdown
Encoding: UTF-8
LazyData: true
LazyDataCompression: xz
RoxygenNote: 7.3.3
NeedsCompilation: no
Packaged: 2026-06-19 11:13:18 UTC; root
Author: Zhexuan Yang [aut, cre], Duchwan Ryu [aut], Feng Luan [aut]
Maintainer: Zhexuan Yang <zky5198@psu.edu>
Repository: https://cran.r-universe.dev
Date/Publication: 2025-12-21 02:31:57 UTC
RemoteUrl: https://github.com/cran/mmcmcBayes
RemoteRef: HEAD
RemoteSha: 479faa1a26737f6d8533f6bf2e194eaa24ee273a