Package: microbiomeMQC
Type: Package
Title: Calculate 4 Key Reporting Measures
Version: 1.0.2
Maintainer: Jacob Dehinsilu <jacobdehinsilu@outlook.com>
Description: Perform calculations for the WHO International Reference
        Reagents for the microbiome. Using strain, species or genera
        abundance tables generated through analysis of 16S ribosomal
        RNA sequencing or shotgun sequencing which included a reference
        reagent. This package will calculate measures of sensitivity,
        False positive relative abundance, diversity, and similarity
        based on mean average abundances with respect to the reference
        reagent.
License: GPL-3
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.2.3
Imports: readxl, vegan
Suggests: testthat, knitr, rmarkdown
VignetteBuilder: knitr
Authors@R: c(person(given = "Jacob",
                      family = "Dehinsilu",
                      role = c("aut", "cre"),
                      email = "jacobdehinsilu@outlook.com",
                      comment = c(ORCID = "0000-0001-9041-970X")),
               person(given = "Ravneet",
                      family = "Bhuller",
                      role = "aut"))
NeedsCompilation: no
Packaged: 2026-06-17 10:08:43 UTC; root
Author: Jacob Dehinsilu [aut, cre]
        (<https://orcid.org/0000-0001-9041-970X>), Ravneet Bhuller
        [aut]
Depends: R (>= 3.5.0)
Repository: https://cran.r-universe.dev
Date/Publication: 2024-09-17 02:33:49 UTC
RemoteUrl: https://github.com/cran/microbiomeMQC
RemoteRef: HEAD
RemoteSha: 6f10af549573b58aec4e2147fee22106ba714cab