Package: metevalue
Type: Package
Title: E-Value in the Omics Data Association Studies
Version: 0.2.4
Date: 2023-05-26
Authors@R: c(person("Yifan", "Yang",  role = c("aut", "cre","cph"),
                    email = "yfyang.86@hotmail.com"),
            person("Xiaoqing", "Pan",  role = "aut"),
            person("Haoyuan", "Liu",  role = "aut"))
Maintainer: Yifan Yang <yfyang.86@hotmail.com>
Description: In the omics data association studies, it is common to
        conduct the p-value corrections to control the false
        significance. Beyond the P-value corrections, E-value is
        recently studied to facilitate multiple testing correction
        based on V. Vovk and R. Wang (2021) <doi:10.1214/20-AOS2020>.
        This package provides E-value calculation for DNA methylation
        data and RNA-seq data. Currently, five data formats are
        supported: DNA methylation levels using DMR detection tools
        (BiSeq, DMRfinder, MethylKit, Metilene and other DNA
        methylation tools) and RNA-seq data. The relevant references
        are listed below: Katja Hebestreit and Hans-Ulrich Klein (2022)
        <doi:10.18129/B9.bioc.BiSeq>; Altuna Akalin et.al (2012)
        <doi:10.18129/B9.bioc.methylKit>.
License: Apache License (>= 2)
RoxygenNote: 7.2.1
Depends: sqldf, psych, dplyr, R (>= 3.5.0)
Encoding: UTF-8
Suggests: rmarkdown, prettydoc, knitr, ggplot2, tidyr, testthat (>=
        3.0.0)
VignetteBuilder: knitr
LazyData: true
Config/testthat/edition: 3
NeedsCompilation: no
Author: Yifan Yang [aut, cre, cph], Xiaoqing Pan [aut], Haoyuan Liu
        [aut]
Packaged: 2026-07-04 06:44:33 UTC; root
Repository: https://cran.r-universe.dev
Date/Publication: 2023-05-26 14:20:06 UTC
RemoteUrl: https://github.com/cran/metevalue
RemoteRef: HEAD
RemoteSha: 3d1acbdc404eae2df708abb79746528765fee636