Package: menstrualcycleR
Title: Phase-Aligned Cycle Time Scaling (PACTS) and Menstrual Cycle
        Analysis
Version: 1.1.1
Authors@R: 
    c(person(given = "Anisha", family = "Nagpal", email ="anagpa7@uic.edu", role = "aut",
           comment = c(ORCID = "0000-0001-7111-9322")),
    person(given = "Tory", family = "Eisenlohr-Moul", email = "temo@uchicago.edu", role = c("aut", "cre"),
           comment = c(ORCID = "0000-0002-9231-3105")))
Description: Implements Phase-Aligned Cycle Time Scaling (PACTS) for
        menstrual cycle data, placing observations from cycles of
        differing length onto a common continuous timeline that
        accounts for variability in ovulation timing. Provides cycle
        time variables anchored on either menses onset or ovulation,
        summaries of how ovulation was determined in each cycle, and
        plotting functions for cycle-aligned outcomes. Methods are
        described in Nagpal et al. (2025)
        <doi:10.1016/j.psyneuen.2025.107584>.
URL: https://menstrualcycler.clearlabresearch.com/,
        https://github.com/eisenlohrmoullab/menstrualcycleR
BugReports: https://github.com/eisenlohrmoullab/menstrualcycleR/issues
License: GPL (>= 3)
Encoding: UTF-8
Imports: dplyr, ggplot2 (>= 3.4.0), magrittr, purrr, rlang, tidyr, zoo,
        viridis, glue, lubridate, shiny
NeedsCompilation: no
Depends: R (>= 3.5.0)
Suggests: knitr, rmarkdown, testthat (>= 3.0.0), marginaleffects, mgcv,
        shinyjs, writexl
Config/testthat/edition: 3
VignetteBuilder: knitr
LazyData: true
Config/roxygen2/version: 8.1.0
Packaged: 2026-11-08 20:48:11 UTC; root
Author: Anisha Nagpal [aut] (ORCID:
        <https://orcid.org/0000-0001-7111-9322>), Tory Eisenlohr-Moul
        [aut, cre] (ORCID: <https://orcid.org/0000-0002-9231-3105>)
Maintainer: Tory Eisenlohr-Moul <temo@uchicago.edu>
Repository: https://cran.r-universe.dev
Date/Publication: 2026-11-08 19:51:47 UTC
RemoteUrl: https://github.com/cran/menstrualcycleR
RemoteRef: HEAD
RemoteSha: dcbe01f9836a189bf6ad07e1d79d1d9f91130003