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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "hibayes" in publications use:'
type: software
license: GPL-3.0-only
title: 'hibayes: Individual-Level, Summary-Level and Single-Step Bayesian Regression
  Model'
version: 3.0.3
doi: 10.32614/CRAN.package.hibayes
abstract: 'A user-friendly tool to fit Bayesian regression models. It can fit 3 types
  of Bayesian models using individual-level, summary-level, and individual plus pedigree-level
  (single-step) data for both Genomic prediction/selection (GS) and Genome-Wide Association
  Study (GWAS), it was designed to estimate joint effects and genetic parameters for
  a complex trait, including: (1) fixed effects and coefficients of covariates, (2)
  environmental random effects, and its corresponding variance, (3) genetic variance,
  (4) residual variance, (5) heritability, (6) genomic estimated breeding values (GEBV)
  for both genotyped and non-genotyped individuals, (7) SNP effect size, (8) phenotype/genetic
  variance explained (PVE) for single or multiple SNPs, (9) posterior probability
  of association of the genomic window (WPPA), (10) posterior inclusive probability
  (PIP). The functions are not limited, we will keep on going in enriching it with
  more features. References: Meuwissen et al. (2001) <https://doi.org/10.1093/genetics/157.4.1819>;
  Gustavo et al. (2013) <https://doi.org/10.1534/genetics.112.143313>; Habier et al.
  (2011) <https://doi.org/10.1186/1471-2105-12-186>; Yi et al. (2008) <https://doi.org/10.1534/genetics.107.085589>;
  Zhou et al. (2013) <https://doi.org/10.1371/journal.pgen.1003264>; Moser et al.
  (2015) <https://doi.org/10.1371/journal.pgen.1004969>; Lloyd-Jones et al. (2019)
  <https://doi.org/10.1038/s41467-019-12653-0>; Henderson (1976) <https://doi.org/10.2307/2529339>;
  Fernando et al. (2014) <https://doi.org/10.1186/1297-9686-46-50>.'
authors:
- family-names: Yin
  given-names: Lilin
  email: ylilin@163.com
- family-names: Zhang
  given-names: Haohao
  email: haohaozhang@whut.edu.cn
- family-names: Liu
  given-names: Xiaolei
  email: xiaoleiliu@mail.hzau.edu.cn
repository: https://CRAN.R-project.org/package=hibayes
repository-code: https://github.com/YinLiLin/hibayes
url: https://github.com/YinLiLin/hibayes
date-released: '2024-02-20'
contact:
- family-names: Yin
  given-names: Lilin
  email: ylilin@163.com