Package: hestia Title: Bayesian Compartmental Infection Models from Individual Outcomes Version: 0.1.0 Authors@R: c(person("Claire Perrin", "Smith", email = "clairesmith6995@gmail.com", role = c("aut", "cre"), comment = c(ORCID = "0000-0003-1069-9460")), person("Jack", "Goodall", email = "jackwgoodall@hotmail.com", role = "aut")) Description: Fit Bayesian compartmental infection models (such as susceptible-infected-recovered and multi-compartment hidden Markov variants) from individual-level outcome data. Models are composed from infection-process and observation-process components and fit using Stan via 'rstan'. License: MIT + file LICENSE Encoding: UTF-8 Language: en-US Biarch: true Depends: R (>= 4.1.0) Imports: checkmate, dplyr, flexstanr (>= 0.2.0), methods, posterior, Rcpp (>= 0.12.0), RcppParallel (>= 5.0.1), rstan (>= 2.18.1), rstantools (>= 2.5.0), stats, tidyr LinkingTo: BH (>= 1.66.0), Rcpp (>= 0.12.0), RcppEigen (>= 0.3.3.3.0), RcppParallel (>= 5.0.1), rstan (>= 2.18.1), StanHeaders (>= 2.18.0) SystemRequirements: GNU make Suggests: bayesplot, ggplot2, knitr, lintr, patchwork, pkgload, rmarkdown, roxygen2, roxyglobals, spelling, testthat (>= 3.0.0), withr VignetteBuilder: knitr Config/testthat/edition: 3 URL: https://accidda.github.io/hestia/, https://github.com/ACCIDDA/hestia BugReports: https://github.com/ACCIDDA/hestia/issues LazyData: true LazyDataCompression: xz Config/roxyglobals/filename: globals.R Config/roxyglobals/unique: FALSE Config/roxygen2/version: 8.1.0 NeedsCompilation: yes Packaged: 2026-10-20 19:47:47 UTC; root Author: Claire Perrin Smith [aut, cre] (ORCID: ), Jack Goodall [aut] Maintainer: Claire Perrin Smith Config/pak/sysreqs: make Repository: https://cran.r-universe.dev Date/Publication: 2026-10-20 15:00:02 UTC RemoteUrl: https://github.com/cran/hestia RemoteRef: HEAD RemoteSha: 36831c95f08e6e43009346c9cd8951de44520953