To cite package ‘harmony’ in publications use:

Patikas N, Yao H, Korsunsky I, Hemberg M, Millard N, Fan J, Slowikowski K, Raychaudhuri S (2026). harmony: Fast, Sensitive, and Accurate Integration of Single Cell Data. R package version 2.0.5, https://CRAN.R-project.org/package=harmony.

Corresponding BibTeX entry:

  @Manual{,
    title = {harmony: Fast, Sensitive, and Accurate Integration of
      Single Cell Data},
    author = {Nikolaos Patikas and Hongcheng Yao and Ilya Korsunsky and
      Martin Hemberg and Nghia Millard and Jean Fan and Kamil
      Slowikowski and Soumya Raychaudhuri},
    year = {2026},
    note = {R package version 2.0.5},
    url = {https://CRAN.R-project.org/package=harmony},
  }