Type: Package
Package: glossa
Title: User-Friendly 'shiny' App for Bayesian Species Distribution
        Models
Version: 1.2.5
Authors@R: c(
    person("Jorge", "Mestre-Tomás", , "jorge.mestre.tomas@csic.es", role = c("aut", "cre"),
           comment = c(ORCID = "0000-0002-8983-3417")),
    person("Alba", "Fuster-Alonso", role = "aut",
           comment = c(ORCID = "0000-0002-7283-291X"))
  )
Description: A user-friendly 'shiny' application for Bayesian machine
        learning analysis of marine species distributions. GLOSSA
        (Global Ocean Species Spatio-temporal Analysis) uses Bayesian
        Additive Regression Trees (BART; Chipman, George, and McCulloch
        (2010) <doi:10.1214/09-AOAS285>) to model species distributions
        with intuitive workflows for data upload, processing, model
        fitting, and result visualization. It supports presence-absence
        and presence-only data (with pseudo-absence generation),
        spatial thinning, cross-validation, and scenario-based
        projections. GLOSSA is designed to facilitate ecological
        research by providing easy-to-use tools for analyzing and
        visualizing marine species distributions across different
        spatial and temporal scales. Optionally, pseudo-absences can be
        generated within the environmental space using the external
        package 'flexsdm' (not on CRAN), which can be downloaded from
        <https://github.com/sjevelazco/flexsdm>; this functionality is
        used conditionally when available and all core features work
        without it.
License: GPL-3
URL: https://github.com/iMARES-group/glossa,
        https://iMARES-group.github.io/glossa/
BugReports: https://github.com/iMARES-group/glossa/issues
Depends: bs4Dash, R (>= 4.1.0), shiny
Imports: automap, blockCV, dbarts, dplyr, DT, GeoThinneR, ggplot2,
        htmltools, leaflet, markdown, pROC, sf, shinyWidgets,
        sparkline, svglite, terra, tidyterra, waiter, zip
Suggests: flexsdm, jsonlite, knitr, matrixStats, rmarkdown, testthat
        (>= 3.0.0), tidyr, tidyverse
Config/testthat/edition: 3
Encoding: UTF-8
Language: en-US
Config/roxygen2/version: 8.1.0
NeedsCompilation: no
Packaged: 2026-10-29 22:07:27 UTC; root
Author: Jorge Mestre-Tomás [aut, cre] (ORCID:
        <https://orcid.org/0000-0002-8983-3417>), Alba Fuster-Alonso
        [aut] (ORCID: <https://orcid.org/0000-0002-7283-291X>)
Maintainer: Jorge Mestre-Tomás <jorge.mestre.tomas@csic.es>
Repository: https://cran.r-universe.dev
Date/Publication: 2026-10-29 21:15:08 UTC
RemoteUrl: https://github.com/cran/glossa
RemoteRef: HEAD
RemoteSha: 8a60b3249cee03b860c02ab50962f75679f15290