| Title: | Rapid Gene Characterization Using Public Genomic Databases |
|---|---|
| Description: | A user-friendly interface for characterizing gene function by disease type and tissue site, integrating curated data from publicly available genomic and proteomic databases to support candidate gene prioritization in experimental workflows. |
| Authors: | Cydnie Martin [aut, cre] |
| Maintainer: | Cydnie Martin <[email protected]> |
| License: | GPL-3 |
| Version: | 1.0.0 |
| Built: | 2026-06-08 20:30:45 UTC |
| Source: | https://github.com/cran/genefindr |
Characterize a gene using public genomic databases
findr(gene, disease = NULL, site = NULL)findr(gene, disease = NULL, site = NULL)
gene |
Character. Gene symbol (e.g. "TP53") |
disease |
Character. Disease context (e.g. "alzheimer") |
site |
Character. Cancer site (e.g. "breast", "lung"). Can be a vector for multi-site comparison. |
Invisibly returns a data frame of results
findr("TP53", site = "breast")findr("TP53", site = "breast")
Characterize multiple genes using public genomic databases
findr_multi(genes, disease = NULL, site = NULL, output = "print")findr_multi(genes, disease = NULL, site = NULL, output = "print")
genes |
Character vector. Gene symbols (e.g. c("TP53", "BRCA1")) |
disease |
Character. Disease context |
site |
Character. Cancer site |
output |
Character. "print" or "table" |
Invisibly returns a data frame of results
findr_multi(c("TP53", "BRCA1"), site = "breast")findr_multi(c("TP53", "BRCA1"), site = "breast")