# -------------------------------------------- # CITATION file created with {cffr} R package # See also: https://docs.ropensci.org/cffr/ # -------------------------------------------- cff-version: 1.2.0 message: 'To cite package "epoc" in publications use:' type: software license: LGPL-3.0-only title: 'epoc: Endogenous Perturbation Analysis of Cancer' version: 0.2.6-1.1 doi: 10.32614/CRAN.package.epoc abstract: Estimates sparse matrices A or G using fast lasso regression from mRNA transcript levels Y and CNA profiles U. Two models are provided, EPoC A where AY + U + R = 0 and EPoC G where Y = GU + E, the matrices R and E are so far treated as noise. For details see the manual page of 'lassoshooting' and the article Rebecka Jörnsten, Tobias Abenius, Teresia Kling, Linnéa Schmidt, Erik Johansson, Torbjörn E M Nordling, Bodil Nordlander, Chris Sander, Peter Gennemark, Keiko Funa, Björn Nilsson, Linda Lindahl, Sven Nelander (2011) . authors: - family-names: Abenius given-names: Tobias email: Tobias.Abenius@Chalmers.se - family-names: Jornsten given-names: Rebecka - family-names: Nelander given-names: Sven repository: https://CRAN.R-project.org/package=epoc date-released: '2018-11-29' contact: - family-names: Abenius given-names: Tobias email: Tobias.Abenius@Chalmers.se