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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "easyLSEA" in publications use:'
type: software
license: MIT
title: 'easyLSEA: Lipid Set Enrichment Analysis with Dual KS and ''fgsea'' Engines'
version: 0.2.1
abstract: 'Provides biology-aware lipid set enrichment analysis (LSEA) for lipidomics
  data using dual engines: the Kolmogorov-Smirnov test and the fast gene set enrichment
  algorithm from the ''fgsea'' package. Annotates lipids into biological groups at
  three levels (lipid class, LIPID MAPS category, functional category) and tests for
  coordinated directional shifts between conditions. Includes fatty acid chain analysis
  with trend plots weighted by lipid abundance (Spearman rank correlation, configurable
  smoothing), wide-format chain position output (sn-1, sn-2, sn-3, sn-4), annotation
  confidence filtering, and export utilities for reproducible reporting in CSV, ''Excel'',
  and PDF formats. Vignettes are available in English and Spanish. Methods are based
  on Subramanian et al. (2005) <https://doi.org/10.1073/pnas.0506580102> and Korotkevich
  et al. (2021) <https://doi.org/10.1101/060012>.'
authors:
- family-names: Guardamino Ojeda
  given-names: David
  email: david.guardamino@gmail.com
  orcid: https://orcid.org/0000-0002-3122-2218
repository: https://cran.r-universe.dev
repository-code: https://github.com/DavidGO464/easyLSEA
commit: 70cad577df5710a0bd8c23bd2e6539902e485645
url: https://github.com/DavidGO464/easyLSEA
date-released: '2026-06-16'
contact:
- family-names: Guardamino Ojeda
  given-names: David
  email: david.guardamino@gmail.com
  orcid: https://orcid.org/0000-0002-3122-2218