Package: coalescentMCMC
Version: 0.5
Date: 2026-07-23
Title: MCMC Algorithms for the Coalescent
Authors@R: person("Emmanuel", "Paradis", role = c("aut", "cre", "cph"), email = "Emmanuel.Paradis@ird.fr", comment = c(ORCID = "0000-0003-3092-2199"))
Depends: ape, coda, lattice
Imports: Matrix, phangorn, splines, stats, utils
ZipData: no
Description: Flexible framework for coalescent analyses in R. It
        includes a main function running the MCMC algorithm, auxiliary
        functions for tree rearrangement, and some functions to compute
        population genetic parameters. Extended description can be
        found in Paradis (2020) <doi:10.1201/9780429466700>. For
        details on the MCMC algorithm, see Kuhner et al. (1995)
        <doi:10.1093/genetics/140.4.1421> and Drummond et al. (2002)
        <doi:10.1093/genetics/161.3.1307>.
License: GPL (>= 2)
NeedsCompilation: yes
Packaged: 2026-07-23 15:49:16 UTC; root
Author: Emmanuel Paradis [aut, cre, cph] (ORCID:
        <https://orcid.org/0000-0003-3092-2199>)
Maintainer: Emmanuel Paradis <Emmanuel.Paradis@ird.fr>
Repository: https://cran.r-universe.dev
Date/Publication: 2026-07-23 10:10:02 UTC
RemoteUrl: https://github.com/cran/coalescentMCMC
RemoteRef: HEAD
RemoteSha: 821fb04eed4df4207441591989ac87bb351d476a