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# CITATION file created with {cffr} R package
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cff-version: 1.2.0
message: 'To cite package "cbioportalR" in publications use:'
type: software
license: MIT
title: 'cbioportalR: Browse and Query Clinical and Genomic Data from cBioPortal'
version: 1.1.1
doi: 10.32614/CRAN.package.cbioportalR
abstract: Provides R users with direct access to genomic and clinical data from the
  'cBioPortal' web resource via user-friendly functions that wrap 'cBioPortal's' existing
  API endpoints <https://www.cbioportal.org/api/swagger-ui/index.html>. Users can
  browse and query genomic data on mutations, copy number alterations and fusions,
  as well as data on tumor mutational burden ('TMB'), microsatellite instability status
  ('MSI'), 'FACETS' and select clinical data points (depending on the study). See
  <https://www.cbioportal.org/> and Gao et al., (2013) <https://doi.org/10.1126/scisignal.2004088>
  for more information on the cBioPortal web resource.
authors:
- family-names: Whiting
  given-names: Karissa
  email: karissa.whiting@gmail.com
  orcid: https://orcid.org/0000-0002-4683-1868
repository: https://CRAN.R-project.org/package=cbioportalR
repository-code: https://github.com/karissawhiting/cbioportalR
url: https://www.karissawhiting.com/cbioportalR/
date-released: '2024-11-20'
contact:
- family-names: Whiting
  given-names: Karissa
  email: karissa.whiting@gmail.com
  orcid: https://orcid.org/0000-0002-4683-1868