Package: birp
Type: Package
Title: Testing for Population Trends Using Low-Cost Ecological Count
        Data
Version: 0.9.0
Date: 2026-09-01
Authors@R: c(person("Madleina", "Caduff", role = c("aut"),
                     email = "madleina.caduff@unifr.ch"),
             person("Andreas", "Füglistaler", role = c("aut", "cre"),
                     email = "andreas.fueglistaler@unifr.ch"),
             person("Daniel", "Wegmann", role = c("aut"),
                     email = "daniel.wegmann@unifr.ch"),
             person("Liam", "Singer", role = c("aut")),
             person("Raphael", "Eckel", role = c("ctb")),
			 person("Conrad", "Sanderson", role = c("cph"),
                     comment = "Author of Armadillo"),
			 person("Ryan", "Curtin", role = c("cph"),
                     comment = "Author of Armadillo"),
			 person("Daniel", "Lemire", role = c("cph"),
                     comment = "Author of fast_float"),
			 person("João Paulo", "Magalhaes", role = c("cph"),
                     comment = "Author of fast_float"),
			 person("Victor", "Zverovich", role = c("cph"),
                     comment = "Author of {fmt}"),
			 person("Rene", "Brun", role = c("cph"),
                     comment = "Author of FindR.cmake (CERN ROOT)"),
			 person("Fons", "Rademakers", role = c("cph"),
                     comment = "Author of FindR.cmake (CERN ROOT)"))
Description: A Bayesian tool to test for population trends and changes
        in trends under arbitrary designs, including before-after (BA),
        control-intervention (CI) and before-after-control-intervention
        (BACI) designs commonly used to assess conservation impact. It
        infers changes in trends jointly from data obtained with
        multiple survey methods, as well as from limited and noisy data
        not necessarily collected in standardized ecological surveys.
        Observed counts can be modeled as following either a Poisson or
        a negative binomial model, and both deterministic and
        stochastic trend models are available. For more details on the
        model see Singer et al. (2025) <doi:10.1101/2025.01.08.631844>,
        and the file 'AUTHORS' for a list of copyright holders and
        contributors.
URL: https://bitbucket.org/wegmannlab/birpr
License: MPL-2.0
Imports: Rcpp (>= 1.0.12), MASS
LinkingTo: Rcpp
SystemRequirements: cmake
Encoding: UTF-8
Suggests: knitr, rmarkdown
VignetteBuilder: knitr
Config/roxygen2/version: 8.0.0
NeedsCompilation: yes
Packaged: 2026-09-26 01:54:56 UTC; root
Author: Madleina Caduff [aut], Andreas Füglistaler [aut, cre], Daniel
        Wegmann [aut], Liam Singer [aut], Raphael Eckel [ctb], Conrad
        Sanderson [cph] (Author of Armadillo), Ryan Curtin [cph]
        (Author of Armadillo), Daniel Lemire [cph] (Author of
        fast_float), João Paulo Magalhaes [cph] (Author of fast_float),
        Victor Zverovich [cph] (Author of {fmt}), Rene Brun [cph]
        (Author of FindR.cmake (CERN ROOT)), Fons Rademakers [cph]
        (Author of FindR.cmake (CERN ROOT))
Maintainer: Andreas Füglistaler <andreas.fueglistaler@unifr.ch>
Config/pak/sysreqs: cmake
Repository: https://cran.r-universe.dev
Date/Publication: 2026-09-25 22:30:02 UTC
RemoteUrl: https://github.com/cran/birp
RemoteRef: HEAD
RemoteSha: 59bb0079bcb4eeeff34893155290e6b3dc5344f7