Package: archipelago
Title: Visualising Variant Set Association Test Results
Version: 0.1.0
License: MIT + file LICENSE
Language: en-GB
Authors@R: 
    person(
        given = "Dylan",
        family = "Lawless",
        email = "admin@switzerlandomics.ch",
        role = c("aut", "cre", "cph"),
        comment = c(ORCID = "0000-0001-8496-3725")
    )
Description: Provides a graphical method for joint visualisation of
        Variant Set Association Test (VSAT) results and individual
        variant association statistics. The Archipelago method assigns
        genomic coordinates to variant set statistics, allowing
        simultaneous display of variant-level and set-level signals in
        a unified plot. This supports interpretation of both collective
        and individual variant contributions in genetic association
        studies using variant aggregation approaches. For more see
        Lawless et al. (2026) <doi:10.1002/gepi.70025>.
Encoding: UTF-8
Imports: ggplot2, dplyr
RoxygenNote: 7.3.3
VignetteBuilder: knitr
Suggests: knitr, rmarkdown, testthat (>= 3.0.0)
Config/testthat/edition: 3
Depends: R (>= 4.1.0)
LazyData: true
NeedsCompilation: no
Packaged: 2026-06-16 11:52:35 UTC; root
Author: Dylan Lawless [aut, cre, cph] (ORCID:
        <https://orcid.org/0000-0001-8496-3725>)
Maintainer: Dylan Lawless <admin@switzerlandomics.ch>
Repository: https://cran.r-universe.dev
Date/Publication: 2026-02-10 21:00:02 UTC
RemoteUrl: https://github.com/cran/archipelago
RemoteRef: HEAD
RemoteSha: 35912ad3ca36a279e54c87ab07e523c3bceac42a