{ "_id": "6a10697facfb0bcc41ca9961", "Package": "wrictools", "Title": "Analyze Whole Room Indirect Calorimetry (WRIC) Data", "Version": "1.0.1", "Authors@R": "c(\nperson(\"Nina\", \"Ziegenbein\", , \"nina.ziegenbein@web.de\", role = c(\"aut\", \"cre\", \"cph\"), comment = c(ORCID = \"0009-0005-4913-8910\")),\nperson(\"Anders\", \"Isaksen\", , \"andaas@rm.dk\", role = \"rev\", comment = c(ORCID = \"0000-0001-8457-5466\")))", "Description": "Provides functions, tutorials, and examples to preprocess,\nanalyze, and visualize data from whole room indirect\ncalorimeters (WRIC) by Maastricht Instruments, using the\n'OmniCal' software. Some functions may also work with WRICs\nfrom other manufacturers, though full functionality has only\nbeen validated for Maastricht Instruments devices.", "License": "GPL (>= 3)", "Encoding": "UTF-8", "RoxygenNote": "7.3.3", "Config/testthat/edition": "3", "URL": "https://github.com/NinaZiegenbein/wrictools,\nhttps://ninaziegenbein.github.io/wrictools/", "BugReports": "https://github.com/NinaZiegenbein/wrictools/issues", "VignetteBuilder": "knitr", "NeedsCompilation": "no", "Packaged": { "Date": "2026-05-07 23:04:08 UTC", "User": "root" }, "Author": "Nina Ziegenbein [aut, cre, cph] (ORCID:\n), Anders Isaksen [rev]\n(ORCID: )", "Maintainer": "Nina Ziegenbein ", "Repository": "https://cran.r-universe.dev", "Date/Publication": "2026-05-07 22:31:49 UTC", "RemoteUrl": "https://github.com/cran/wrictools", "RemoteRef": "HEAD", "RemoteSha": "6813da8a2923a3c7d6cd94af335562cd434def05", "MD5sum": "d34a6178bee3248d95afeb007ef66775", "_user": "cran", "_type": "src", "_file": "wrictools_1.0.1.tar.gz", "_fileid": "535ebf1390db75e58ede5ae2cecea5cb12eaf1dbfa133e87f2130951c7370089", "_filesize": 1114667, "_sha256": "535ebf1390db75e58ede5ae2cecea5cb12eaf1dbfa133e87f2130951c7370089", "_created": "2026-05-07T23:04:08.000Z", "_published": "2026-05-22T14:34:39.072Z", "_distro": "noble", "_jobs": [ { "job": 77401028493, "time": 159, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "6868364161" }, { "job": 77401028498, "time": 144, "config": "linux-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "6868360917" }, { "job": 77401025710, "time": 216, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "6868329266" }, { "job": 77401027793, "time": 119, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7163086492" } ], "_buildurl": "https://github.com/r-universe/cran/actions/runs/25526723208", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/cran/wrictools", "_commit": { "id": "6813da8a2923a3c7d6cd94af335562cd434def05", "author": "Nina Ziegenbein ", "committer": "cran-robot ", "message": "version 1.0.1\n", "time": 1778193109 }, "_maintainer": { "name": "Nina Ziegenbein", "email": "nina.ziegenbein@web.de", "login": "ninaziegenbein", "uuid": 63342767 }, "_registered": true, "_dependencies": [ { "package": "dplyr", "role": "Imports" }, { "package": "ggplot2", "role": "Imports" }, { "package": "magrittr", "role": "Imports" }, { "package": "RCurl", "role": "Imports" }, { "package": "readr", "role": "Imports" }, { "package": "rlang", "role": "Imports" }, { "package": "tidyr", "role": "Imports" }, { "package": "readxl", "role": "Imports" }, { "package": "knitr", "role": "Suggests" }, { "package": "rmarkdown", "role": "Suggests" }, { "package": "testthat", "version": ">= 3.0.0", "role": "Suggests" } ], "_owner": "cran", "_selfowned": false, "_usedby": 0, "_updates": [ { "week": "2026-19", "n": 1 } ], "_tags": [ { "name": "1.0.1", "date": "2026-05-07" } ], "_stars": 0, "_contributors": [ { "user": "ninaziegenbein", "count": 1, "uuid": 63342767 } ], "_userbio": { "uuid": 6899542, "type": "organization", "name": "cran", "description": "Unofficial read-only mirror of all CRAN R packages" }, "_downloads": { "count": 0, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/wrictools" }, "_devurl": "https://github.com/ninaziegenbein/wrictools", "_pkgdown": "https://ninaziegenbein.github.io/wrictools/", "_rbuild": "4.6.0", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/NEWS.html", "extra/NEWS.txt", "extra/readme.html", "extra/readme.md", "extra/wrictools.html", "manual.pdf" ], "_cranurl": false, "_releases": [ { "version": "1.0.1", "date": "2026-05-07" } ], "_exports": [ "%>%", "add_relative_time", "analyse_methanol_burn", "analyse_zero_test", "check_code", "check_discrepancies", "combine_measurements", "create_wric_df", "create_wric_df_new", "cut_rows", "detect_start_end", "export_file_from_redcap", "extract_meta_data", "extract_metadata_new", "extract_note_info", "extract_note_info_new", "preprocess_wric_file", "preprocess_wric_files", "upload_file_to_redcap", "visualize_with_protocol" ], "_help": [ { "page": "add_relative_time", "title": "Add Relative Time in minutes to DataFrame. Rows before the 'start_time' will be indicated negative.", "topics": [ "add_relative_time" ] }, { "page": "analyse_methanol_burn", "title": "Analyse methanol burn experiment", "topics": [ "analyse_methanol_burn" ] }, { "page": "analyse_zero_test", "title": "Analyse a Zero Test WRIC file", "topics": [ "analyse_zero_test" ] }, { "page": "check_code", "title": "Check the subject ID code and return corresponding Room 1 and Room 2 codes.", "topics": [ "check_code" ] }, { "page": "check_discrepancies", "title": "Checks for discrepancies between S1 and S2 measurements in the DataFrame and prints them to the console. This function is not included in the big pre-processing function, as it is more intended to perform a quality check on your data and not to automatically inform the processing of the data.", "topics": [ "check_discrepancies" ] }, { "page": "combine_measurements", "title": "Combines S1 and S2 measurements in the DataFrame using the specified method.", "topics": [ "combine_measurements" ] }, { "page": "create_wric_df", "title": "Creates DataFrames for wric data from a file and optionally saves them as CSV files.", "topics": [ "create_wric_df" ] }, { "page": "create_wric_df_new", "title": "Creates a DataFrame for WRIC data from the new Omnical software format.", "topics": [ "create_wric_df_new" ] }, { "page": "cut_rows", "title": "Filters rows in a DataFrame based on an optional start and end datetime range.", "topics": [ "cut_rows" ] }, { "page": "detect_start_end", "title": "Automatically detect enter and exit from the chamber based on the notefile. Returns the start and end times for two participants.", "topics": [ "detect_start_end" ] }, { "page": "export_file_from_redcap", "title": "Exports a file from REDCap based on the specified record ID and field name.", "topics": [ "export_file_from_redcap" ] }, { "page": "extract_meta_data", "title": "Extracts metadata (software v1) for two subjects from text lines and optionally saves it as CSV files.", "topics": [ "extract_meta_data" ] }, { "page": "extract_metadata_new", "title": "Extracts metadata (software v2) for a single subject from text lines and optionally saves it as a CSV file.", "topics": [ "extract_metadata_new" ] }, { "page": "extract_note_info", "title": "Apply protocol events from note files to room data", "topics": [ "extract_note_info" ] }, { "page": "extract_note_info_new", "title": "Apply protocol events from note files to a single room data frame (new software)", "topics": [ "extract_note_info_new" ] }, { "page": "preprocess_wric_file", "title": "Preprocesses a wric data file, extracting metadata, creating DataFrames, and optionally saving results.", "topics": [ "preprocess_wric_file" ] }, { "page": "preprocess_wric_files", "title": "Preprocesses multiple wric_files by RedCAP record ID, extracting metadata, creating DataFrames, and optionally saving results.", "topics": [ "preprocess_wric_files" ] }, { "page": "upload_file_to_redcap", "title": "Uploads a file to REDCap for a specified record ID and field name.", "topics": [ "upload_file_to_redcap" ] }, { "page": "visualize_with_protocol", "title": "Visualizes time-series data from a WRIC CSV file, highlighting protocol changes and optionally saving the plot.", "topics": [ "visualize_with_protocol" ] } ], "_readme": "https://github.com/cran/wrictools/raw/HEAD/README.md", "_rundeps": [ "bit", "bit64", "bitops", "cellranger", "cli", "clipr", "cpp11", "crayon", "dplyr", "farver", "generics", "ggplot2", "glue", "gtable", "hms", "isoband", "labeling", "lifecycle", "magrittr", "pillar", "pkgconfig", "prettyunits", "progress", "purrr", "R6", "RColorBrewer", "RCurl", "readr", "readxl", "rematch", "rlang", "S7", "scales", "stringi", "stringr", "tibble", "tidyr", "tidyselect", "tzdb", "utf8", "vctrs", "viridisLite", "vroom", "withr" ], "_vignettes": [ { "source": "RedCAP.Rmd", "filename": "RedCAP.html", "title": "RedCAP", "engine": "knitr::rmarkdown", "headings": [ "Introduction", "Overview of the Tasks", "1. Obtain Your API Token", "2. Set Up the Configuration File", "3. Export Files from RedCap", "4. Process multiple files from RedCap", "5. Upload Files to RedCap" ], "created": "2026-05-07 22:31:49", "modified": "2026-05-07 22:31:49", "commits": 1 }, { "source": "test_analysis.Rmd", "filename": "test_analysis.html", "title": "Analyzing WRIC Data: Zero Tests and Methanol Burns", "engine": "knitr::rmarkdown", "headings": [ "Introduction", "Zero Test Analysis", "Methanol Burn Analysis" ], "created": "2026-05-07 22:31:49", "modified": "2026-05-07 22:31:49", "commits": 1 }, { "source": "wrictools.Rmd", "filename": "wrictools.html", "title": "wrictools", "engine": "knitr::rmarkdown", "headings": [ "FAQ and \"Programming Terms\"", "What is the difference between R and RStudio?", "R vs Rmd", "Getting Started", "Preprocess WRIC data", "Your Turn", "Automatic note file extraction - adaptation to your notes", "A bit more information about extracting data from the notefile", "Batch Processing", "Option 1 - Pairs based on shared dates", "Option 2 - Based on File-Pairs", "RedCap", "Working with a subset of the data (specific time)", "Visualizing" ], "created": "2026-05-07 22:31:49", "modified": "2026-05-07 22:31:49", "commits": 1 } ], "_score": 3.1760912590556813, "_indexed": true, "_nocasepkg": "wrictools", "_universes": [ "cran", "ninaziegenbein" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.0.1", "date": "2026-05-07T23:06:35.000Z", "distro": "noble", "commit": "6813da8a2923a3c7d6cd94af335562cd434def05", "fileid": "95dd2f47510b43f884a04d68f07b5b0ed3e3cc67ac0319671384db9ab88c9293", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/25526723208" }, { "r": "4.6.0", "os": "linux", "version": "1.0.1", "date": "2026-05-07T23:06:18.000Z", "distro": "noble", "commit": "6813da8a2923a3c7d6cd94af335562cd434def05", "fileid": "3285958988ba792b162ab58c318754a7461d3fa66e215a12cfc9e9eb953f8abe", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/25526723208" }, { "r": "4.6.0", "os": "wasm", "version": "1.0.1", "date": "2026-05-22T14:34:24.000Z", "commit": "6813da8a2923a3c7d6cd94af335562cd434def05", "fileid": "8856e84085c582bb642f38c1a5353bf9fe0d7c7ba87c28ed2ae17ba007e7360e", "status": "success", "buildurl": "https://github.com/r-universe/cran/actions/runs/25526723208" } ] }