{
  "_id": "6a185a62acfb0bcc41dbad19",
  "Package": "unitcm",
  "Version": "0.1.2",
  "Title": "Client for the 'UniTCM' Traditional Chinese Medicine Platform",
  "Description": "Provides functions to query the 'UniTCM' API\n(<https://unitcm.qfxulab.com>), covering herb exploration,\ncompound/ADMET (Absorption, Distribution, Metabolism,\nExcretion, and Toxicity) data, disease-formula associations,\nTraditional Chinese Medicine (TCM) ontology, transcriptomics,\nand gene-disease analysis (MIDAS, Mining Integrated Disease\nAssociation Sources).",
  "Authors@R": "person(\"Xiao\", \"Zheng\", email = \"12519088@zju.edu.cn\",\nrole = c(\"aut\", \"cre\"), comment = c(ORCID = \"0009-0000-3918-5725\"))",
  "Author": "Xiao Zheng [aut, cre] (ORCID:\n<https://orcid.org/0009-0000-3918-5725>)",
  "Maintainer": "Xiao Zheng <12519088@zju.edu.cn>",
  "License": "MIT + file LICENSE",
  "Encoding": "UTF-8",
  "URL": "https://zx122ty.github.io/UniTCM_R_Package/,\nhttps://github.com/zx122ty/UniTCM_R_Package",
  "BugReports": "https://github.com/zx122ty/UniTCM_R_Package/issues",
  "VignetteBuilder": "knitr",
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  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-28 15:04:04 UTC",
    "User": "root"
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  "Repository": "https://cran.r-universe.dev",
  "Date/Publication": "2026-05-28 12:49:00 UTC",
  "RemoteUrl": "https://github.com/cran/unitcm",
  "RemoteRef": "HEAD",
  "RemoteSha": "3a3a841d216b37716e19cf065113ce0e6f0c519f",
  "MD5sum": "cb5a1b8014111d3f4ec5cc764310ec6e",
  "_user": "cran",
  "_type": "src",
  "_file": "unitcm_0.1.2.tar.gz",
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  "_created": "2026-05-28T15:04:04.000Z",
  "_published": "2026-05-28T15:08:18.088Z",
  "_distro": "noble",
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  "_buildurl": "https://github.com/r-universe/cran/actions/runs/26582530005",
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  "_upstream": "https://github.com/cran/unitcm",
  "_commit": {
    "id": "3a3a841d216b37716e19cf065113ce0e6f0c519f",
    "author": "Xiao Zheng <12519088@zju.edu.cn>",
    "committer": "cran-robot <csardi.gabor+cran@gmail.com>",
    "message": "version 0.1.2\n",
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  "_exports": [
    "aggregated_target2np",
    "as_igraph",
    "as_tidygraph",
    "autocomplete_disease",
    "batch_target2np",
    "build_formula_herb_network",
    "build_hct_network",
    "clear_api_key",
    "clear_unitcm_token",
    "convert_gene_ids",
    "detect_communities",
    "export_compound_module",
    "export_compounds",
    "export_datasets",
    "export_herb_compounds",
    "export_herbs",
    "export_ontology",
    "fetch_compound_facets",
    "fetch_dataset_facets",
    "fetch_dataset_stats",
    "fetch_disease_tree",
    "fetch_herb_facets",
    "fetch_home_stats",
    "fetch_latest_submissions",
    "fetch_mechanism_filters",
    "fetch_midas_sources",
    "fetch_midas_stats",
    "fetch_netvis_stats",
    "fetch_omics_type_stats",
    "fetch_ontology_stats",
    "fetch_ontology_tree",
    "fetch_target2np_filters",
    "fetch_target2np_stats",
    "fetch_tcm_classification_stats",
    "fetch_transcriptome_filters",
    "fetch_transcriptome_stats",
    "find_path",
    "flatten_response",
    "get_analysis_data",
    "get_analysis_modules",
    "get_api_key",
    "get_base_url",
    "get_compound",
    "get_compound_admet",
    "get_compound_herbs",
    "get_compound_targets",
    "get_dataset",
    "get_formula",
    "get_formula_doses",
    "get_herb",
    "get_herb_compounds",
    "get_mechanism",
    "get_neighbors",
    "get_node_detail",
    "get_node_metrics",
    "get_ontology_ancestors",
    "get_ontology_by_level",
    "get_ontology_children",
    "get_ontology_descendants",
    "get_ontology_entity",
    "get_similar_datasets",
    "get_subgraph",
    "get_target2np",
    "get_term",
    "get_transcriptome",
    "get_unitcm_token",
    "list_book_sources",
    "list_dosage_forms",
    "list_ontology_categories",
    "list_origin_sources",
    "list_term_categories",
    "list_term_sources",
    "plot_compound_radar",
    "plot_enrichment",
    "plot_network",
    "query_disease_enrichment",
    "query_disease_genes",
    "query_disease_intersection",
    "query_gene_diseases",
    "query_source_comparison",
    "search_compounds",
    "search_datasets",
    "search_formulas",
    "search_herbs",
    "search_mechanisms",
    "search_netvis",
    "search_ontology",
    "search_ontology_mapping",
    "search_target2np",
    "search_target2np_drugclip",
    "search_target2np_sea",
    "search_terms",
    "search_transcriptomes",
    "set_api_key",
    "set_base_url",
    "set_unitcm_token",
    "target2np_multi_source_summary",
    "unitcm_cache_clear"
  ],
  "_help": [
    {
      "page": "aggregated_target2np",
      "title": "Aggregated Target2NP view across data sources",
      "topics": [
        "aggregated_target2np"
      ]
    },
    {
      "page": "as_igraph",
      "title": "Convert a NetVis graph response to igraph",
      "topics": [
        "as_igraph"
      ]
    },
    {
      "page": "as_tidygraph",
      "title": "Convert a NetVis graph response to tidygraph",
      "topics": [
        "as_tidygraph"
      ]
    },
    {
      "page": "autocomplete_disease",
      "title": "Autocomplete disease names (MIDAS)",
      "topics": [
        "autocomplete_disease"
      ]
    },
    {
      "page": "batch_target2np",
      "title": "Batch query Target2NP by identifier list",
      "topics": [
        "batch_target2np"
      ]
    },
    {
      "page": "build_formula_herb_network",
      "title": "Build a Formula-Herb network",
      "topics": [
        "build_formula_herb_network"
      ]
    },
    {
      "page": "build_hct_network",
      "title": "Build an Herb-Compound-Target network",
      "topics": [
        "build_hct_network"
      ]
    },
    {
      "page": "clear_api_key",
      "title": "Clear the UniTCM API Key",
      "topics": [
        "clear_api_key"
      ]
    },
    {
      "page": "clear_unitcm_token",
      "title": "Clear the UniTCM API token",
      "topics": [
        "clear_unitcm_token"
      ]
    },
    {
      "page": "convert_gene_ids",
      "title": "Convert gene identifiers (MIDAS)",
      "topics": [
        "convert_gene_ids"
      ]
    },
    {
      "page": "detect_communities",
      "title": "Detect communities in a graph",
      "topics": [
        "detect_communities"
      ]
    },
    {
      "page": "export_compound_module",
      "title": "Export compound data by module",
      "topics": [
        "export_compound_module"
      ]
    },
    {
      "page": "export_compounds",
      "title": "Export compounds to CSV",
      "topics": [
        "export_compounds"
      ]
    },
    {
      "page": "export_datasets",
      "title": "Export datasets to CSV",
      "topics": [
        "export_datasets"
      ]
    },
    {
      "page": "export_herb_compounds",
      "title": "Export herb compounds to CSV",
      "topics": [
        "export_herb_compounds"
      ]
    },
    {
      "page": "export_herbs",
      "title": "Export herbs to CSV",
      "topics": [
        "export_herbs"
      ]
    },
    {
      "page": "export_ontology",
      "title": "Export the TCM ontology",
      "topics": [
        "export_ontology"
      ]
    },
    {
      "page": "fetch_compound_facets",
      "title": "Get compound facets and statistics",
      "topics": [
        "fetch_compound_facets"
      ]
    },
    {
      "page": "fetch_dataset_facets",
      "title": "Get dataset facets",
      "topics": [
        "fetch_dataset_facets"
      ]
    },
    {
      "page": "fetch_dataset_stats",
      "title": "Get TCMomics database statistics",
      "topics": [
        "fetch_dataset_stats"
      ]
    },
    {
      "page": "fetch_disease_tree",
      "title": "Get the ICD-11 disease classification tree",
      "topics": [
        "fetch_disease_tree"
      ]
    },
    {
      "page": "fetch_herb_facets",
      "title": "Get herb filter facets",
      "topics": [
        "fetch_herb_facets"
      ]
    },
    {
      "page": "fetch_home_stats",
      "title": "Get homepage statistics",
      "topics": [
        "fetch_home_stats"
      ]
    },
    {
      "page": "fetch_latest_submissions",
      "title": "Get latest submissions",
      "topics": [
        "fetch_latest_submissions"
      ]
    },
    {
      "page": "fetch_mechanism_filters",
      "title": "Get mechanism filter options",
      "topics": [
        "fetch_mechanism_filters"
      ]
    },
    {
      "page": "fetch_midas_sources",
      "title": "Get MIDAS data sources",
      "topics": [
        "fetch_midas_sources"
      ]
    },
    {
      "page": "fetch_midas_stats",
      "title": "Get MIDAS statistics",
      "topics": [
        "fetch_midas_stats"
      ]
    },
    {
      "page": "fetch_netvis_stats",
      "title": "Get NetVis network statistics",
      "topics": [
        "fetch_netvis_stats"
      ]
    },
    {
      "page": "fetch_omics_type_stats",
      "title": "Get omics type statistics",
      "topics": [
        "fetch_omics_type_stats"
      ]
    },
    {
      "page": "fetch_ontology_stats",
      "title": "Fetch ontology statistics",
      "topics": [
        "fetch_ontology_stats"
      ]
    },
    {
      "page": "fetch_ontology_tree",
      "title": "Fetch the TCM ontology tree",
      "topics": [
        "fetch_ontology_tree"
      ]
    },
    {
      "page": "fetch_target2np_filters",
      "title": "Fetch Target2NP filter options",
      "topics": [
        "fetch_target2np_filters"
      ]
    },
    {
      "page": "fetch_target2np_stats",
      "title": "Fetch Target2NP database statistics",
      "topics": [
        "fetch_target2np_stats"
      ]
    },
    {
      "page": "fetch_tcm_classification_stats",
      "title": "Get TCM classification statistics",
      "topics": [
        "fetch_tcm_classification_stats"
      ]
    },
    {
      "page": "fetch_transcriptome_filters",
      "title": "Get transcriptome filter options",
      "topics": [
        "fetch_transcriptome_filters"
      ]
    },
    {
      "page": "fetch_transcriptome_stats",
      "title": "Get Transcriptome Hub statistics",
      "topics": [
        "fetch_transcriptome_stats"
      ]
    },
    {
      "page": "find_path",
      "title": "Find shortest path between two nodes",
      "topics": [
        "find_path"
      ]
    },
    {
      "page": "flatten_response",
      "title": "Flatten a nested API response to a tibble",
      "topics": [
        "flatten_response"
      ]
    },
    {
      "page": "get_analysis_data",
      "title": "Get analysis data for a transcriptome dataset",
      "topics": [
        "get_analysis_data"
      ]
    },
    {
      "page": "get_analysis_modules",
      "title": "List available analysis modules for a dataset",
      "topics": [
        "get_analysis_modules"
      ]
    },
    {
      "page": "get_api_key",
      "title": "Get the UniTCM API Key",
      "topics": [
        "get_api_key"
      ]
    },
    {
      "page": "get_base_url",
      "title": "Get the UniTCM API base URL",
      "topics": [
        "get_base_url"
      ]
    },
    {
      "page": "get_compound",
      "title": "Get a single compound by ID",
      "topics": [
        "get_compound"
      ]
    },
    {
      "page": "get_compound_admet",
      "title": "Get ADMET predictions for a compound",
      "topics": [
        "get_compound_admet"
      ]
    },
    {
      "page": "get_compound_herbs",
      "title": "Get herbs containing a compound",
      "topics": [
        "get_compound_herbs"
      ]
    },
    {
      "page": "get_compound_targets",
      "title": "Get predicted targets for a compound",
      "topics": [
        "get_compound_targets"
      ]
    },
    {
      "page": "get_dataset",
      "title": "Get a single dataset by submission ID",
      "topics": [
        "get_dataset"
      ]
    },
    {
      "page": "get_formula",
      "title": "Get a single formula by order ID",
      "topics": [
        "get_formula"
      ]
    },
    {
      "page": "get_formula_doses",
      "title": "Get herb doses for a formula",
      "topics": [
        "get_formula_doses"
      ]
    },
    {
      "page": "get_herb",
      "title": "Get a single herb by ID",
      "topics": [
        "get_herb"
      ]
    },
    {
      "page": "get_herb_compounds",
      "title": "Get compounds for a herb",
      "topics": [
        "get_herb_compounds"
      ]
    },
    {
      "page": "get_mechanism",
      "title": "Get a single mechanism term by ID",
      "topics": [
        "get_mechanism"
      ]
    },
    {
      "page": "get_neighbors",
      "title": "Get neighbors of a node",
      "topics": [
        "get_neighbors"
      ]
    },
    {
      "page": "get_node_detail",
      "title": "Get node detail",
      "topics": [
        "get_node_detail"
      ]
    },
    {
      "page": "get_node_metrics",
      "title": "Get node metrics",
      "topics": [
        "get_node_metrics"
      ]
    },
    {
      "page": "get_ontology_ancestors",
      "title": "Get ancestors of an ontology entity",
      "topics": [
        "get_ontology_ancestors"
      ]
    },
    {
      "page": "get_ontology_by_level",
      "title": "Get ontology entities by level",
      "topics": [
        "get_ontology_by_level"
      ]
    },
    {
      "page": "get_ontology_children",
      "title": "Get children of an ontology entity",
      "topics": [
        "get_ontology_children"
      ]
    },
    {
      "page": "get_ontology_descendants",
      "title": "Get all descendants of an ontology entity",
      "topics": [
        "get_ontology_descendants"
      ]
    },
    {
      "page": "get_ontology_entity",
      "title": "Get a TCM ontology entity",
      "topics": [
        "get_ontology_entity"
      ]
    },
    {
      "page": "get_similar_datasets",
      "title": "Get similar datasets",
      "topics": [
        "get_similar_datasets"
      ]
    },
    {
      "page": "get_subgraph",
      "title": "Get subgraph for a set of nodes",
      "topics": [
        "get_subgraph"
      ]
    },
    {
      "page": "get_target2np",
      "title": "Get a single Target2NP interaction record",
      "topics": [
        "get_target2np"
      ]
    },
    {
      "page": "get_term",
      "title": "Get a single term by ID",
      "topics": [
        "get_term"
      ]
    },
    {
      "page": "get_transcriptome",
      "title": "Get a single transcriptome dataset",
      "topics": [
        "get_transcriptome"
      ]
    },
    {
      "page": "get_unitcm_token",
      "title": "Get the UniTCM API token",
      "topics": [
        "get_unitcm_token"
      ]
    },
    {
      "page": "list_book_sources",
      "title": "List book sources",
      "topics": [
        "list_book_sources"
      ]
    },
    {
      "page": "list_dosage_forms",
      "title": "List dosage forms",
      "topics": [
        "list_dosage_forms"
      ]
    },
    {
      "page": "list_ontology_categories",
      "title": "List top-level ontology categories",
      "topics": [
        "list_ontology_categories"
      ]
    },
    {
      "page": "list_origin_sources",
      "title": "List origin sources",
      "topics": [
        "list_origin_sources"
      ]
    },
    {
      "page": "list_term_categories",
      "title": "List term categories",
      "topics": [
        "list_term_categories"
      ]
    },
    {
      "page": "list_term_sources",
      "title": "List term sources",
      "topics": [
        "list_term_sources"
      ]
    },
    {
      "page": "plot_compound_radar",
      "title": "Plot compound physicochemical radar chart",
      "topics": [
        "plot_compound_radar"
      ]
    },
    {
      "page": "plot_enrichment",
      "title": "Plot enrichment results",
      "topics": [
        "plot_enrichment"
      ]
    },
    {
      "page": "plot_network",
      "title": "Plot a network graph",
      "topics": [
        "plot_network"
      ]
    },
    {
      "page": "query_disease_enrichment",
      "title": "Disease enrichment analysis (MIDAS)",
      "topics": [
        "query_disease_enrichment"
      ]
    },
    {
      "page": "query_disease_genes",
      "title": "Query disease-to-gene associations (MIDAS)",
      "topics": [
        "query_disease_genes"
      ]
    },
    {
      "page": "query_disease_intersection",
      "title": "Find disease intersection (MIDAS)",
      "topics": [
        "query_disease_intersection"
      ]
    },
    {
      "page": "query_gene_diseases",
      "title": "Query gene-to-disease associations (MIDAS)",
      "topics": [
        "query_gene_diseases"
      ]
    },
    {
      "page": "query_source_comparison",
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