{ "_id": "6a27b34324555f66ed537cab", "Package": "tEDM", "Title": "Temporal Empirical Dynamic Modeling", "Version": "1.3", "Authors@R": "person(given = \"Wenbo\", family = \"Lyu\",\nemail = \"lyu.geosocial@gmail.com\",\nrole = c(\"aut\", \"cre\", \"cph\"),\ncomment = c(ORCID = \"0009-0002-6003-3800\"))", "Description": "Inferring causation from time series data through\nempirical dynamic modeling (EDM), with methods such as\nconvergent cross mapping from Sugihara et al. (2012)\n, partial cross mapping introduced\nby Leng et al. (2020) , and\ncross mapping cardinality described in Tao et al. (2023)\n, following a systematic\ndescription proposed in Lyu et al. (2026)\n.", "License": "GPL-3", "Encoding": "UTF-8", "RoxygenNote": "7.3.3", "URL": "https://stscl.github.io/tEDM/, https://github.com/stscl/tEDM", "BugReports": "https://github.com/stscl/tEDM/issues", "VignetteBuilder": "knitr", "NeedsCompilation": "yes", "Packaged": { "Date": "2026-06-09 06:26:34 UTC", "User": "root" }, "Author": "Wenbo Lyu [aut, cre, cph] (ORCID:\n)", "Maintainer": "Wenbo Lyu ", "Repository": "https://cran.r-universe.dev", "Date/Publication": "2026-03-30 17:15:58 UTC", "RemoteUrl": "https://github.com/cran/tEDM", "RemoteRef": "HEAD", "RemoteSha": "e06ce4f70d2724d4bea290643076a5a5bc0a9dbc", "MD5sum": "3df4f9655b6cc5fea0e9197d8c77eef7", "_user": "cran", "_type": "src", "_file": "tEDM_1.3.tar.gz", "_fileid": "5228aef2b0b754402256a98c077d3a0e1d7d8da78f2a468dc89acea1c3a610f9", "_filesize": 2709277, "_sha256": "5228aef2b0b754402256a98c077d3a0e1d7d8da78f2a468dc89acea1c3a610f9", "_created": "2026-06-09T06:26:34.000Z", "_published": "2026-06-09T06:31:31.891Z", "_distro": "noble", "_jobs": [ { "job": 80261680930, "time": 196, "config": "linux-devel-arm64", "r": "4.7.0", "check": "OK", "artifact": "7500130782" }, { "job": 80261680963, "time": 191, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "7500128723" }, { "job": 80261680942, "time": 202, "config": "linux-release-arm64", "r": "4.6.0", "check": "OK", "artifact": "7500132310" }, { "job": 80261680945, "time": 187, "config": "linux-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "7500127724" }, { "job": 80261045391, "time": 287, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7500074911" }, { "job": 80261680881, "time": 198, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7500130725" } ], "_buildurl": "https://github.com/r-universe/cran/actions/runs/27187924653", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/cran/tEDM", "_commit": { "id": "e06ce4f70d2724d4bea290643076a5a5bc0a9dbc", "author": "Wenbo Lyu ", "committer": "cran-robot ", "message": "version 1.3\n", "time": 1774890958 }, "_maintainer": { "name": "Wenbo Lyu", "email": "lyu.geosocial@gmail.com", "login": "spatlyu", "uuid": 118346681 }, "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 4.1.0", "role": "Depends" }, { "package": "Rcpp", "role": "LinkingTo" }, { "package": "RcppThread", "role": "LinkingTo" }, { "package": "RcppArmadillo", "role": "LinkingTo" }, { "package": "dplyr", "role": "Imports" }, { "package": "ggplot2", "role": "Imports" }, { "package": "methods", "role": "Imports" }, { "package": "Rcpp", "role": "Imports" }, { "package": "RcppThread", "role": "Suggests" }, { "package": "RcppArmadillo", "role": "Suggests" }, { "package": "readr", "role": "Suggests" }, { "package": "plot3D", "role": "Suggests" }, { "package": "spEDM", "role": "Suggests" }, { "package": "knitr", "role": "Suggests" }, { "package": "rmarkdown", "role": "Suggests" }, { "package": "purrr", "role": "Suggests" }, { "package": "tidyr", "role": "Suggests" }, { "package": "cowplot", "role": "Suggests" } ], "_owner": "cran", "_selfowned": false, "_usedby": 0, "_updates": [ { "week": "2025-29", "n": 1 }, { "week": "2025-35", "n": 1 }, { "week": "2026-03", "n": 1 }, { "week": "2026-14", "n": 1 } ], "_tags": [ { "name": "1.0", "date": "2025-07-15" }, { "name": "1.1", "date": "2025-08-25" }, { "name": "1.2", "date": "2026-01-15" }, { "name": "1.3", "date": "2026-03-30" } ], "_stars": 0, "_contributors": [ { "user": "spatlyu", "count": 4, "uuid": 118346681 } ], "_userbio": { "uuid": 6899542, "type": "organization", "name": "cran", "description": "Unofficial read-only mirror of all CRAN R packages" }, "_downloads": { "count": 198, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/tEDM" }, "_devurl": "https://github.com/stscl/tedm", "_pkgdown": "https://stscl.github.io/tEDM/", "_searchresults": 2, "_topics": [ "openblas", "cpp" ], "_rbuild": "4.6.0", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/NEWS.html", "extra/NEWS.txt", "extra/readme.html", "extra/readme.md", "extra/tEDM.html", "manual.pdf" ], "_homeurl": "https://github.com/stscl/tedm", "_realowner": "stscl", "_cranurl": false, "_releases": [ { "version": "1.0", "date": "2025-07-15" }, { "version": "1.1", "date": "2025-08-25" }, { "version": "1.2", "date": "2026-01-15" }, { "version": "1.3", "date": "2026-03-30" } ], "_exports": [ "ccm", "cmc", "embedded", "fnn", "ic", "logistic_map", "multispatialccm", "pcm", "simplex", "smap" ], "_help": [ { "page": "ccm", "title": "convergent cross mapping", "topics": [ "ccm", "ccm,data.frame-method" ] }, { "page": "cmc", "title": "cross mapping cardinality", "topics": [ "cmc", "cmc,data.frame-method" ] }, { "page": "embedded", "title": "embedding time series data", "topics": [ "embedded", "embedded,data.frame-method" ] }, { "page": "fnn", "title": "false nearest neighbours", "topics": [ "fnn", "fnn,data.frame-method" ] }, { "page": "ic", "title": "optimal parameter search for intersectional cardinality", "topics": [ "ic", "ic,data.frame-method" ] }, { "page": "logistic_map", "title": "logistic map", "topics": [ "logistic_map" ] }, { "page": "multispatialccm", "title": "multispatial convergent cross mapping", "topics": [ "multispatialccm", "multispatialccm,list-method" ] }, { "page": "pcm", "title": "partial cross mapping", "topics": [ "pcm", "pcm,data.frame-method" ] }, { "page": "simplex", "title": "optimal parameter search for simplex projection", "topics": [ "simplex", "simplex,data.frame-method", "simplex,list-method" ] }, { "page": "smap", "title": "optimal parameter search for s-mapping", "topics": [ "smap", "smap,data.frame-method" ] } ], "_readme": "https://github.com/cran/tEDM/raw/HEAD/README.md", "_rundeps": [ "cli", "cpp11", "dplyr", "farver", "generics", "ggplot2", "glue", "gtable", "isoband", "labeling", "lifecycle", "magrittr", "pillar", "pkgconfig", "R6", "RColorBrewer", "Rcpp", "RcppArmadillo", "RcppThread", "rlang", "S7", "scales", "tibble", "tidyselect", "utf8", "vctrs", "viridisLite", "withr" ], "_sysdeps": [ { "shlib": "liblapack", "package": "libopenblas0-pthread", "source": "openblas", "version": "0.3.26+ds-1ubuntu0.1", "name": "openblas", "homepage": "https://www.openblas.net/", "description": "Optimized BLAS (linear algebra) library (shared lib, pthread)" }, { "shlib": "libblas", "package": "libopenblas0-pthread", "source": "openblas", "version": "0.3.26+ds-1ubuntu0.1", "name": "openblas", "homepage": "https://www.openblas.net/", "description": "Optimized BLAS (linear algebra) library (shared lib, pthread)" }, { "shlib": "libstdc++", "package": "libstdc++6", "source": "gcc", "version": "14.2.0-4ubuntu2~24.04.1", "name": "c++", "homepage": "http://gcc.gnu.org/", "description": "GNU Standard C++ Library v3" } ], "_vignettes": [ { "source": "tEDM.Rmd", "filename": "tEDM.html", "title": "Temporal Empirical Dynamic Modeling", "engine": "knitr::rmarkdown", "headings": [ "1. Introduction to the tEDM package", "2. Example data in the tEDM package", "Hong Kong Air Pollution and Cardiovascular Admissions", "US County-Level Carbon Emissions Dataset", "COVID-19 Infection Counts in Japan", "3. Case studies of the tEDM package", "Air Pollution and Cardiovascular Health in Hong Kong", "US County Carbon Emissions and Temperature Dynamics", "COVID-19 Spread Across Japanese Prefectures", "Reference" ], "created": "2025-07-15 13:06:35", "modified": "2026-03-30 17:15:58", "commits": 4 } ], "_score": 3.3010299956639813, "_indexed": false, "_nocasepkg": "tedm", "_universes": [ "cran" ], "_indexurl": "https://stscl.r-universe.dev/tEDM", "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.3", "date": "2026-06-09T06:29:50.000Z", "distro": "noble", "arch": "aarch64", "commit": "e06ce4f70d2724d4bea290643076a5a5bc0a9dbc", "fileid": "7052f250c9f1313c1b7ec5780f82791d48682d04be3245e5081cfb7f4047cbca", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/27187924653" }, { "r": "4.7.0", "os": "linux", "version": "1.3", "date": "2026-06-09T06:29:48.000Z", "distro": "noble", "arch": "x86_64", "commit": "e06ce4f70d2724d4bea290643076a5a5bc0a9dbc", "fileid": "547ef903e21bbea253fd22fc3cd2973a1d6631661b52a916cf3682176fa03b75", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/27187924653" }, { "r": "4.6.0", "os": "linux", "version": "1.3", "date": "2026-06-09T06:29:53.000Z", "distro": "noble", "arch": "aarch64", "commit": "e06ce4f70d2724d4bea290643076a5a5bc0a9dbc", "fileid": "0adeaf74647e8538622bcc6fdc22f40eaef4ec11b4aa51f04b8f1a1279dbabb4", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/27187924653" }, { "r": "4.6.0", "os": "linux", "version": "1.3", "date": "2026-06-09T06:29:44.000Z", "distro": "noble", "arch": "x86_64", "commit": "e06ce4f70d2724d4bea290643076a5a5bc0a9dbc", "fileid": "17b288fbc21019fb03877b63bae8dadd3024f4fd1cfcb678a726325697508784", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/27187924653" }, { "r": "4.6.0", "os": "wasm", "version": "1.3", "date": "2026-06-09T06:30:18.000Z", "arch": "emscripten", "commit": "e06ce4f70d2724d4bea290643076a5a5bc0a9dbc", "fileid": "f40fcb23b6bc447c4b6188b1e55447ece6f5ea4b03501d9df18faffab2735926", "status": "success", "buildurl": "https://github.com/r-universe/cran/actions/runs/27187924653" } ] }