{
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  "Package": "swash",
  "Type": "Package",
  "Title": "Health Geography Toolbox for Model-Based Analysis of Infections\nPanel Data",
  "Version": "3.0.3",
  "Date": "2026-11-01",
  "Authors@R": "person(\"Thomas\", \"Wieland\", role = c(\"aut\", \"cre\"),\nemail = \"geowieland@googlemail.com\",\ncomment = c(ORCID = \"0000-0001-5168-9846\"))",
  "Author": "Thomas Wieland [aut, cre] (ORCID:\n<https://orcid.org/0000-0001-5168-9846>)",
  "Maintainer": "Thomas Wieland <geowieland@googlemail.com>",
  "Description": "Within epidemic outbreaks, infections grow and decline\ndifferently between regions, and the velocity of spatial spread\ndiffers between countries. The swash library offers a set of\nmodel-based analyses for these topics. Spread velocity may be\nanalysed with the Swash-Backwash Model of the Single Epidemic\nWave by Cliff and Haggett (2006)\n<doi:10.1007/s10109-006-0027-8> and corresponding functions for\nbootstrap confidence intervals, country comparison, and\nvisualization of results. Differences in epidemic growth\nbetween regions may be analysed using logistic growth models,\nexponential growth models, Hawkes processes and breakpoint\nanalyses. Cluster and hotspot analyses can be conducted using\nneighborhood matrices. See Wieland (2020)\n<doi:10.18335/region.v7i2.324> for an application of some of\nthe mentioned analysis methods. All functionalities are\naccessed by the class \"infpan\" for infections panel data\ndefined in this package, which is built from a data.frame\nprovided by the user.",
  "License": "GPL-3",
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    "calculate_cum",
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    "calculate_rollmean",
    "calculate_rollsum",
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    "compare_countries",
    "confint",
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    "getisord",
    "growth",
    "growth_breaks",
    "growth_hawkes",
    "growth_initial",
    "gstar",
    "hawkes_growth",
    "hist_ci",
    "is_balanced",
    "load_infections_paneldata",
    "logistic_growth",
    "metrics",
    "moran",
    "nbmatrix",
    "nbstat",
    "plot",
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    "plot_map",
    "print",
    "quantile_ci",
    "R_t",
    "spatial_statistic",
    "summary",
    "swash",
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      "title": "swash: Health Geography Toolbox for Model-Based Analysis of Infections Panel Data",
      "topics": [
        "swash-package"
      ]
    },
    {
      "page": "add_geodata",
      "title": "Adding Geodata to Infpan Object",
      "topics": [
        "add_geodata"
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    },
    {
      "page": "add_geodata-method",
      "title": "Methods for Function 'add_geodata'",
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        "add_geodata,infpan-method",
        "add_geodata-methods"
      ]
    },
    {
      "page": "as_balanced",
      "title": "Correction of Non-balanced Panel Dataset with Regional Infection Data",
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      "title": "Time Series Model with Breakpoints",
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      "title": "Class '\"breaksgrowth\"'",
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        "plot,breaksgrowth-method",
        "print,breaksgrowth-method",
        "show,breaksgrowth-method",
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      "topics": [
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    {
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      "title": "Cumulative Infection Numbers",
      "topics": [
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    },
    {
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      "title": "Methods for Function 'calculate_cum'",
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        "calculate_cum-methods"
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    },
    {
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      "title": "Incidence from Infection Numbers",
      "topics": [
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    },
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      "title": "Methods for Function 'calculate_incidence'",
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