{
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  "Package": "smam",
  "Title": "Statistical Modeling of Animal Movements",
  "Version": "0.7.3",
  "Date": "2026-03-06",
  "Authors@R": "c(\nperson(\"Chaoran\", \"Hu\", email = \"huchaoran.stat@gmail.com\", role = c(\"aut\", \"cre\")),\nperson(\"Vladimir\", \"Pozdnyakov\", email = \"vladimir.pozdnyakov@uconn.edu\", role = \"aut\"),\nperson(\"Jun\", \"Yan\", email = \"jun.yan@uconn.edu\", role = \"aut\"))",
  "Description": "Animal movement models including Moving-Resting Process\nwith Embedded Brownian Motion (Yan et al., 2014,\n<doi:10.1007/s10144-013-0428-8>; Pozdnyakov et al., 2017,\n<doi:10.1007/s11009-017-9547-6>), Brownian Motion with\nMeasurement Error (Pozdnyakov et al., 2014,\n<doi:10.1890/13-0532.1>), Moving-Resting-Handling Process with\nEmbedded Brownian Motion (Pozdnyakov et al., 2020,\n<doi:10.1007/s11009-020-09774-1>), Moving-Resting Process with\nMeasurement Error (Hu et al., 2021,\n<doi:10.1111/2041-210X.13694>), Moving-Moving Process with two\nEmbedded Brownian Motions.",
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  "Author": "Chaoran Hu [aut, cre], Vladimir Pozdnyakov [aut], Jun Yan [aut]",
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    "rMovRes",
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        "dN"
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        "approxNormalOrder2"
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    },
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      "title": "Density for Time Spent in Moving or Resting",
      "topics": [
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        "dtr"
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    },
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      "page": "estimate",
      "title": "Estimate Result of smam Estimators",
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        "estimate.smam_bmme",
        "estimate.smam_mm",
        "estimate.smam_mr",
        "estimate.smam_mrh",
        "estimate.smam_mrme"
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        "estVarMRMEnaive_pBootstrap",
        "estVarMRME_Godambe",
        "estVarMRME_pBootstrap"
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        "fitBmme"
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        "fitMM"
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        "fitMR"
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        "fitMRME_naive"
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