{ "_id": "6ae0694593f02b9aed979e32", "Package": "r3PG", "Type": "Package", "Title": "Simulating Forest Growth using the 3-PG Model", "Description": "Provides a flexible and easy-to-use interface for the\nPhysiological Processes Predicting Growth (3-PG) model written\nin Fortran. The r3PG serves as a flexible and easy-to-use\ninterface for the 3-PGpjs (monospecific, evenaged and evergreen\nforests) described in Landsberg & Waring (1997)\n and the 3-PGmix (deciduous,\nuneven-aged or mixed-species forests) described in Forrester &\nTang (2016) .", "Date": "2023-09-18", "Version": "0.1.6", "Authors@R": "c(\nperson(\"Volodymyr\", \"Trotsiuk\", email = \"volodymyr.trotsiuk@wsl.ch\", role = c(\"aut\", 'cre'), comment=c(ORCID=\"0000-0002-8363-656X\")),\nperson(\"Florian\", \"Hartig\", email = \"florian.hartig@biologie.uni-regensburg.de\", role = c(\"aut\"), comment=c(ORCID=\"0000-0002-6255-9059\")),\nperson(\"David\", \"Forrester\", email = \"David.Forrester@csiro.au\", role = c(\"aut\")),\nperson(\"Ramiro\", \"Silveyra Gonzalez\", email = \"ramiro.gonzalez@kit.edu\", role = c(\"aut\"), comment=c(ORCID=\"0000-0002-3430-8383\"))\n)", "License": "GPL-3", "VignetteBuilder": "R.rsp", "Encoding": "UTF-8", "LazyData": "true", "RoxygenNote": "7.1.2", "URL": "https://github.com/trotsiuk/r3PG", "BugReports": "https://github.com/trotsiuk/r3PG/issues", "NeedsCompilation": "yes", "Packaged": { "Date": "2026-10-27 09:00:00 UTC", "User": "root" }, "Author": "Volodymyr Trotsiuk [aut, cre]\n(), Florian Hartig [aut]\n(), David Forrester\n[aut], Ramiro Silveyra Gonzalez [aut]\n()", "Maintainer": "Volodymyr Trotsiuk ", "Repository": "https://cran.r-universe.dev", "Date/Publication": "2023-09-19 09:31:07 UTC", "RemoteUrl": "https://github.com/cran/r3PG", "RemoteRef": "HEAD", "RemoteSha": "ec7e6a30d668d5c30ed6b8eaa4ba1fbff66f8789", "_user": "cran", "_type": "src", "_file": "r3PG_0.1.6.tar.gz", "_fileid": "https://r2.ropensci.org/315118b70bd1eb80b750dd0c0e8253cb029ffe54271fa6e61dcc75bfbd9b203a", "_filesize": 608573, "_sha256": "315118b70bd1eb80b750dd0c0e8253cb029ffe54271fa6e61dcc75bfbd9b203a", "_expires": "2027-02-04T09:05:07.000Z", "_created": "2026-10-27T09:00:00.000Z", "_published": "2026-10-27T09:05:09.592Z", "_upstream": "https://github.com/cran/r3PG", "_status": "success", "_maintainer": { "name": "Volodymyr Trotsiuk", "email": "volodymyr.trotsiuk@wsl.ch", "login": "trotsiuk", "orcid": "0000-0002-8363-656X", "description": "RESEARCHER and DATA SCIENTIST", "uuid": 15097779 }, "_jobs": [ { "job": 122099360192, "time": 160, "config": "linux-devel-arm64", "r": "4.7.0", "check": "OK", "artifact": "12720534466" }, { "job": 122099359987, "time": 154, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "12721338516" }, { "job": 122099360003, "time": 152, "config": "linux-release-arm64", "r": "4.6.1", "check": "OK", "artifact": "12721163999" }, { "job": 122099360027, "time": 168, "config": "linux-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "12720309891" }, { "job": 122097896654, "time": 215, "config": "source", "r": "4.6.1", "check": "OK", "artifact": "12721183497" }, { "job": 122099360108, "time": 121, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "12720753552" }, { "job": 122099360228, "time": 262, "config": "windows-devel-arm64", "r": "4.7.0", "check": "OK", "artifact": "12720778554" }, { "job": 122099360213, "time": 149, "config": "windows-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "12721830385" }, { "job": 122099359992, "time": 241, "config": "windows-release-arm64", "r": "4.6.1", "check": "WARNING", "artifact": "12721283976" }, { "job": 122099360141, "time": 119, "config": "windows-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "12720559172" } ], "_buildurl": "https://github.com/r-universe/cran/actions/runs/40477056465", "_commit": { "id": "ec7e6a30d668d5c30ed6b8eaa4ba1fbff66f8789", "author": "Volodymyr Trotsiuk ", "committer": "cran-robot ", "message": "version 0.1.6\n", "time": 1695115867 }, "_distro": "resolute", "_host": "GitHub-Actions", "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 3.5.0", "role": "Depends" }, { "package": "knitr", "version": ">= 1.15.1", "role": "Suggests" }, { "package": "rmarkdown", "version": ">= 1.3", "role": "Suggests" }, { "package": "R.rsp", "version": ">= 0.40.0", "role": "Suggests" }, { "package": "testthat", "version": ">= 1.0.2", "role": "Suggests" }, { "package": "roxygen2", "role": "Suggests" }, { "package": "BayesianTools", "role": "Suggests" }, { "package": "sensitivity", "role": "Suggests" }, { "package": "dplyr", "role": "Suggests" }, { "package": "ggplot2", "role": "Suggests" } ], "_owner": "cran", "_selfowned": false, "_usedby": 0, "_updates": [], "_tags": [], "_stars": 1, "_contributors": [ { "user": "trotsiuk", "count": 7, "uuid": 15097779 } ], "_userbio": { "uuid": 6899542, "type": "organization", "name": "cran", "followers": 634, "description": "Unofficial read-only mirror of all CRAN R packages" }, "_downloads": { "count": 287, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/r3PG" }, "_devurl": "https://github.com/trotsiuk/r3pg", "_searchresults": 31, "_topics": [ "fortran", "glibc" ], "_rbuild": "4.6.1", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/manual.pdf", "extra/r3PG.html" ], "_homeurl": "https://github.com/trotsiuk/r3pg", "_realowner": "trotsiuk", "_cranurl": false, "_releases": [ { "version": "0.1.0", "date": "2020-05-11" }, { "version": "0.1.1", "date": "2020-05-19" }, { "version": "0.1.2", "date": "2020-06-03" }, { "version": "0.1.3", "date": "2021-02-20" }, { "version": "0.1.4", "date": "2022-05-19" }, { "version": "0.1.5", "date": "2023-07-04" }, { "version": "0.1.6", "date": "2023-09-19" } ], "_exports": [ "get_parameters", "i_output", "i_parameters", "i_parameters_lit", "i_sizeDist", "prepare_climate", "prepare_input", "prepare_parameters", "prepare_site", "prepare_sizeDist", "prepare_species", "prepare_thinning", "run_3PG" ], "_datasets": [ { "name": "d_climate", "title": "Climate input", "object": "d_climate", "class": [ "tbl_df", "tbl", "data.frame" ], "fields": [ "year", "month", "tmp_min", "tmp_max", "tmp_ave", "prcp", "srad", "frost_days", "co2", "d13catm" ], "rows": 168, "table": true, "tojson": true }, { "name": "d_parameters", "title": "Parameters input", "object": "d_parameters", "class": [ "tbl_df", "tbl", "data.frame" ], "fields": [ "parameter", "Fagus sylvatica", "Pinus sylvestris" ], "rows": 82, "table": true, "tojson": true }, { "name": "d_site", "title": "Site input", "object": "d_site", "class": [ "tbl_df", "tbl", "data.frame" ], "fields": [ "latitude", "altitude", "soil_class", "asw_i", "asw_min", "asw_max", "from", "to" ], "rows": 1, "table": true, "tojson": true }, { "name": "d_sizeDist", "title": "sizeDist input", "object": "d_sizeDist", "class": [ "tbl_df", "tbl", "data.frame" ], "fields": [ "parameter", "Fagus sylvatica", "Pinus sylvestris" ], "rows": 30, "table": true, "tojson": true }, { "name": "d_species", "title": "Species input", "object": "d_species", "class": [ "tbl_df", "tbl", "data.frame" ], "fields": [ "species", "planted", "fertility", "stems_n", "biom_stem", "biom_root", "biom_foliage" ], "rows": 2, "table": true, "tojson": true }, { "name": "d_thinning", "title": "Thinning input", "object": "d_thinning", "class": [ "tbl_df", "tbl", "data.frame" ], "fields": [ "species", "age", "stems_n", "stem", "root", "foliage" ], "rows": 3, "table": true, "tojson": true } ], "_help": [ { "page": "d_climate", "title": "Climate input", "topics": [ "d_climate" ] }, { "page": "d_parameters", "title": "Parameters input", "topics": [ "d_parameters" ] }, { "page": "d_site", "title": "Site input", "topics": [ "d_site" ] }, { "page": "d_sizeDist", "title": "sizeDist input", "topics": [ "d_sizeDist" ] }, { "page": "d_species", "title": "Species input", "topics": [ "d_species" ] }, { "page": "d_thinning", "title": "Thinning input", "topics": [ "d_thinning" ] }, { "page": "get_parameters", "title": "Get parameter sets", "topics": [ "get_parameters" ] }, { "page": "i_output", "title": "Information about model outputs", "topics": [ "i_output" ] }, { "page": "i_parameters", "title": "Information about parameters", "topics": [ "i_parameters" ] }, { "page": "i_parameters_lit", "title": "Information about literature parameters", "topics": [ "i_parameters_lit" ] }, { "page": "i_sizeDist", "title": "Information about size distribution parameters", "topics": [ "i_sizeDist" ] }, { "page": "prepare_climate", "title": "Subsets or replicate a climate data", "topics": [ "prepare_climate" ] }, { "page": "prepare_input", "title": "Check and prepare input for running 3-PG model", "topics": [ "prepare_input" ] }, { "page": "prepare_parameters", "title": "Prepare parameters table", "topics": [ "prepare_parameters" ] }, { "page": "prepare_site", "title": "Check the site data for consistency", "topics": [ "prepare_site" ] }, { "page": "prepare_sizeDist", "title": "Prepare parameters table", "topics": [ "prepare_sizeDist" ] }, { "page": "prepare_species", "title": "Check the species data for consistency", "topics": [ "prepare_species" ] }, { "page": "prepare_thinning", "title": "Check and prepare management information.", "topics": [ "prepare_thinning" ] }, { "page": "r3PG", "title": "Simulating Forest Growth using the 3-PG Process-Based Vegetation Model", "topics": [ "r3PG-package", "r3PG" ] }, { "page": "run_3PG", "title": "Runs a 3-PG model simulation", "topics": [ "run_3PG" ] } ], "_rundeps": [], "_sysdeps": [ { "shlib": "libgfortran", "package": "libgfortran5", "source": "gcc", "version": "16-20260322-1ubuntu1", "name": "fortran", "homepage": "http://gcc.gnu.org/", "description": "Runtime library for GNU Fortran applications" }, { "shlib": "libmvec", "package": "libc6", "headers": "libc6-dev", "source": "glibc", "version": "2.43-2ubuntu2.4", "name": "glibc", "homepage": "https://www.gnu.org/software/libc/libc.html", "description": "GNU C Library: Shared libraries" } ], "_vignettes": [ { "source": "r3PG-ReferenceManual.html.asis", "filename": "r3PG-ReferenceManual.html", "title": "Vignette for the r3PG R package", "engine": "R.rsp::asis", "headings": [ "The r3PG R package", "Purpose", "Single model runs", "Sensitivity analysis and Bayesian calibration", "Spatial simulations", "References", "Session" ], "created": "2020-05-11 14:10:06", "modified": "2020-05-11 14:10:06", "commits": 1 } ], "_score": 2.4913616938342726, "_indexed": false, "_nocasepkg": "r3pg", "_universes": [ "cran" ], "_indexurl": "https://trotsiuk.r-universe.dev/r3PG", "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "0.1.6", "date": "2026-10-27T09:02:45.000Z", "distro": "resolute", "arch": "aarch64", "commit": "ec7e6a30d668d5c30ed6b8eaa4ba1fbff66f8789", "fileid": "https://r2.ropensci.org/0231d92281751f3c3febea6b99224362de9623940efe366a1c4226cc75b4bec6", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/40477056465" }, { "r": "4.7.0", "os": "linux", "version": "0.1.6", "date": "2026-10-27T09:02:34.000Z", "distro": "resolute", "arch": "x86_64", "commit": "ec7e6a30d668d5c30ed6b8eaa4ba1fbff66f8789", "fileid": "https://r2.ropensci.org/3856cef4eddeeff242e4620921c97419cbf401cfebcd30cde463438df3b24262", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/40477056465" }, { "r": "4.6.1", "os": "linux", "version": "0.1.6", "date": "2026-10-27T09:02:35.000Z", "distro": "resolute", "arch": "aarch64", "commit": "ec7e6a30d668d5c30ed6b8eaa4ba1fbff66f8789", "fileid": "https://r2.ropensci.org/fce2f7bfdaf55240a5701d1b5f82278c36ed4992893c91beb9dd1cafd7358e6a", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/40477056465" }, { "r": "4.6.1", "os": "linux", "version": "0.1.6", "date": "2026-10-27T09:02:55.000Z", "distro": "resolute", "arch": "x86_64", "commit": "ec7e6a30d668d5c30ed6b8eaa4ba1fbff66f8789", "fileid": "https://r2.ropensci.org/d3a1a44320d27643384c36e44359546a18862781d7e45f7bda65e192f66eb4d2", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/40477056465" }, { "r": "4.6.0", "os": "wasm", "version": "0.1.6", "date": "2026-10-27T09:02:13.000Z", "arch": "emscripten", "commit": "ec7e6a30d668d5c30ed6b8eaa4ba1fbff66f8789", "fileid": "https://r2.ropensci.org/58813dd1cb7eadd61e5e3fa475f026170eab08ad78abedefb4279d419397c284", "status": "success", "buildurl": "https://github.com/r-universe/cran/actions/runs/40477056465" }, { "r": "4.7.0", "os": "win", "version": "0.1.6", "date": "2026-10-27T09:04:09.000Z", "arch": "aarch64", "commit": "ec7e6a30d668d5c30ed6b8eaa4ba1fbff66f8789", "fileid": "https://r2.ropensci.org/934e5227cc6af6b3c6d0168743c683883d517f5b96bb2290d3c80c28b2492439", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/40477056465" }, { "r": "4.7.0", "os": "win", "version": "0.1.6", "date": "2026-10-27T09:01:29.000Z", "arch": "x86_64", "commit": "ec7e6a30d668d5c30ed6b8eaa4ba1fbff66f8789", "fileid": "https://r2.ropensci.org/b29f5825de33c0fcc92b898de720b0fc5579f04377562b51992aa54a40bb64b5", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/40477056465" }, { "r": "4.6.1", "os": "win", "version": "0.1.6", "date": "2026-10-27T09:03:50.000Z", "arch": "aarch64", "commit": "ec7e6a30d668d5c30ed6b8eaa4ba1fbff66f8789", "fileid": "https://r2.ropensci.org/a8ae125162f966907abd579281d678e5d988065de1c6b27c463be08e0469e5f6", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/cran/actions/runs/40477056465" }, { "r": "4.6.1", "os": "win", "version": "0.1.6", "date": "2026-10-27T09:01:36.000Z", "arch": "x86_64", "commit": "ec7e6a30d668d5c30ed6b8eaa4ba1fbff66f8789", "fileid": "https://r2.ropensci.org/08b67a7c444337aa5763d9dc740b2ca7374d7a1edcf3d04495f35b9d21d9cabc", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/40477056465" } ] }