{
  "_id": "6ad4a8b264aea59ac637bdf9",
  "Package": "prototest",
  "Type": "Package",
  "Title": "Inference on Prototypes from Clusters of Features",
  "Version": "1.3",
  "Date": "2026-09-17",
  "Authors@R": "person(given = \"Stephen\",\nfamily = \"Reid\",\nrole = c(\"aut\", \"cre\"),\nemail = \"sreid1652@gmail.com\")",
  "Description": "Procedures for testing for group-wide signal in clusters\nof variables. Tests can be performed for single groups in\nisolation (univariate) or multiple groups together\n(multivariate). Specific tests include the exact and\napproximate (un)selective likelihood ratio tests described in\nReid et al (2015), the selective F test and marginal screening\nprototype test of Reid and Tibshirani (2015). User may\npre-specify columns to be included in prototype formation, or\nallow the function to select them itself. A mixture of these\ntwo is also possible. Any variable selection is accounted for\nusing the selective inference framework. Options for\nnon-sampling and hit-and-run null reference distributions.",
  "License": "GPL (>= 2)",
  "URL": "https://arxiv.org/abs/1511.07839",
  "Config/roxygen2/version": "8.1.0",
  "NeedsCompilation": "yes",
  "Packaged": {
    "Date": "2026-10-18 11:03:21 UTC",
    "User": "root"
  },
  "Author": "Stephen Reid [aut, cre]",
  "Maintainer": "Stephen Reid <sreid1652@gmail.com>",
  "Repository": "https://cran.r-universe.dev",
  "Date/Publication": "2026-09-18 06:00:02 UTC",
  "RemoteUrl": "https://github.com/cran/prototest",
  "RemoteRef": "HEAD",
  "RemoteSha": "5a6472869ffbfe20e15f7759406de462d140f269",
  "_user": "cran",
  "_type": "src",
  "_file": "prototest_1.3.tar.gz",
  "_fileid": "https://r2.ropensci.org/2cf6f1eab1908f2dff2bf3142503da5185f026f9fc172898262e0d4e089ffbdc",
  "_filesize": 231081,
  "_sha256": "2cf6f1eab1908f2dff2bf3142503da5185f026f9fc172898262e0d4e089ffbdc",
  "_expires": "2027-01-26T11:08:32.000Z",
  "_created": "2026-10-18T11:03:21.000Z",
  "_published": "2026-10-18T11:08:34.554Z",
  "_buildurl": "https://github.com/r-universe/cran/actions/runs/39121517468",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_jobs": [
    {
      "job": 117658555776,
      "time": 116,
      "config": "linux-devel-arm64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "12134456471"
    },
    {
      "job": 117658555774,
      "time": 146,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "12134292418"
    },
    {
      "job": 117658555757,
      "time": 109,
      "config": "linux-release-arm64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "12134891148"
    },
    {
      "job": 117658555886,
      "time": 124,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "12134945787"
    },
    {
      "job": 117657995329,
      "time": 167,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "12134696428"
    },
    {
      "job": 117658555855,
      "time": 115,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "12135100233"
    },
    {
      "job": 117658555724,
      "time": 244,
      "config": "windows-devel-arm64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "12134028438"
    },
    {
      "job": 117658555709,
      "time": 172,
      "config": "windows-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "12134177787"
    },
    {
      "job": 117658555808,
      "time": 235,
      "config": "windows-release-arm64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "12134013323"
    },
    {
      "job": 117658555850,
      "time": 168,
      "config": "windows-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "12134273768"
    }
  ],
  "_upstream": "https://github.com/cran/prototest",
  "_commit": {
    "id": "5a6472869ffbfe20e15f7759406de462d140f269",
    "author": "Stephen Reid <sreid1652@gmail.com>",
    "committer": "cran-robot <csardi.gabor+cran@gmail.com>",
    "message": "version 1.3\n",
    "time": 1789711202
  },
  "_maintainer": {
    "name": "Stephen Reid",
    "email": "sreid1652@gmail.com"
  },
  "_distro": "resolute",
  "_registered": true,
  "_dependencies": [
    {
      "package": "intervals",
      "role": "Depends"
    },
    {
      "package": "MASS",
      "role": "Depends"
    },
    {
      "package": "glmnet",
      "role": "Depends"
    },
    {
      "package": "Rcpp",
      "role": "LinkingTo"
    },
    {
      "package": "RcppArmadillo",
      "role": "LinkingTo"
    },
    {
      "package": "Rcpp",
      "version": ">= 0.12.1",
      "role": "Imports"
    }
  ],
  "_owner": "cran",
  "_selfowned": false,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2026-38",
      "n": 1
    }
  ],
  "_tags": [
    {
      "name": "1.3",
      "date": "2026-09-18"
    }
  ],
  "_stars": 0,
  "_contributors": [
    {
      "user": "sreid11",
      "count": 1,
      "uuid": 12155919
    }
  ],
  "_userbio": {
    "uuid": 6899542,
    "type": "organization",
    "name": "cran",
    "followers": 632,
    "description": "Unofficial read-only mirror of all CRAN R packages"
  },
  "_downloads": {
    "count": 523,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/prototest"
  },
  "_searchresults": 4,
  "_topics": [
    "openblas",
    "cpp"
  ],
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/manual.pdf",
    "extra/prototest.html"
  ],
  "_realowner": "cran",
  "_cranurl": false,
  "_releases": [
    {
      "version": "1.1",
      "date": "2016-01-14"
    },
    {
      "version": "1.2",
      "date": "2019-02-03"
    },
    {
      "version": "1.3",
      "date": "2026-09-18"
    }
  ],
  "_exports": [
    "prototest.multivariate",
    "prototest.univariate"
  ],
  "_help": [
    {
      "page": "prototest-package",
      "title": "Inference on Prototypes from Clusters of Features",
      "topics": [
        "prototest-package",
        "prototest"
      ]
    },
    {
      "page": "print.prototest",
      "title": "Print 'prototest' object",
      "topics": [
        "print.prototest"
      ]
    },
    {
      "page": "prototest.multivariate",
      "title": "Perform Prototype or F tests for Significance of Groups of Predictors in the Multivariate Model",
      "topics": [
        "prototest.multivariate"
      ]
    },
    {
      "page": "prototest.univariate",
      "title": "Perform Prototype or F Tests for Significance of Groups of Predictors in the Univariate Model",
      "topics": [
        "prototest.univariate"
      ]
    }
  ],
  "_rundeps": [
    "codetools",
    "foreach",
    "glmnet",
    "intervals",
    "iterators",
    "lattice",
    "MASS",
    "Matrix",
    "Rcpp",
    "RcppArmadillo",
    "RcppEigen",
    "shape",
    "survival"
  ],
  "_sysdeps": [
    {
      "shlib": "liblapack",
      "package": "libopenblas0-pthread",
      "source": "openblas",
      "version": "0.3.32+ds-5",
      "name": "openblas",
      "homepage": "https://www.openblas.net/",
      "description": "Optimized BLAS (linear algebra) library (shared lib, pthread)"
    },
    {
      "shlib": "libblas",
      "package": "libopenblas0-pthread",
      "source": "openblas",
      "version": "0.3.32+ds-5",
      "name": "openblas",
      "homepage": "https://www.openblas.net/",
      "description": "Optimized BLAS (linear algebra) library (shared lib, pthread)"
    },
    {
      "shlib": "libstdc++",
      "package": "libstdc++6",
      "source": "gcc",
      "version": "16-20260322-1ubuntu1",
      "name": "c++",
      "homepage": "http://gcc.gnu.org/",
      "description": "GNU Standard C++ Library v3"
    }
  ],
  "_score": 1,
  "_indexed": true,
  "_nocasepkg": "prototest",
  "_universes": [
    "cran"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.3",
      "date": "2026-10-18T11:05:15.000Z",
      "distro": "resolute",
      "arch": "aarch64",
      "commit": "5a6472869ffbfe20e15f7759406de462d140f269",
      "fileid": "https://r2.ropensci.org/3edf2890241e2d1d3e5a76f21f70f5d1ebbd5e0eb73eb81becd056acada2ec76",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/39121517468"
    },
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.3",
      "date": "2026-10-18T11:05:28.000Z",
      "distro": "resolute",
      "arch": "x86_64",
      "commit": "5a6472869ffbfe20e15f7759406de462d140f269",
      "fileid": "https://r2.ropensci.org/18620553c69ae795b162114123d5aa9647910817eef76f0a0f7aedfd1a24d3d1",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/39121517468"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "1.3",
      "date": "2026-10-18T11:05:10.000Z",
      "distro": "resolute",
      "arch": "aarch64",
      "commit": "5a6472869ffbfe20e15f7759406de462d140f269",
      "fileid": "https://r2.ropensci.org/59b2333698bab8c6ae20deca8e687e52738634de5727fa9f6ba18bed4f899ef9",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/39121517468"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "1.3",
      "date": "2026-10-18T11:05:29.000Z",
      "distro": "resolute",
      "arch": "x86_64",
      "commit": "5a6472869ffbfe20e15f7759406de462d140f269",
      "fileid": "https://r2.ropensci.org/081c2ec0c027ebbf1cbbf2cdb60694148f436736e96f030618d6782c32349e0b",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/39121517468"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.3",
      "date": "2026-10-18T11:05:37.000Z",
      "arch": "emscripten",
      "commit": "5a6472869ffbfe20e15f7759406de462d140f269",
      "fileid": "https://r2.ropensci.org/29764f0fc43e96960be30030ae5d9358481c92c74855e6c6d6567701bc3913e1",
      "status": "success",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/39121517468"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.3",
      "date": "2026-10-18T11:06:53.000Z",
      "arch": "aarch64",
      "commit": "5a6472869ffbfe20e15f7759406de462d140f269",
      "fileid": "https://r2.ropensci.org/43f542e114b32076230529b753b7ec80b5e573e0c28d31e78d29322201df6f0d",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/39121517468"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.3",
      "date": "2026-10-18T11:04:54.000Z",
      "arch": "x86_64",
      "commit": "5a6472869ffbfe20e15f7759406de462d140f269",
      "fileid": "https://r2.ropensci.org/61317a50b75476a6de8326b00153064343b390dc05238f29832449b5381b0a39",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/39121517468"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "1.3",
      "date": "2026-10-18T11:06:50.000Z",
      "arch": "aarch64",
      "commit": "5a6472869ffbfe20e15f7759406de462d140f269",
      "fileid": "https://r2.ropensci.org/0055af54a9abdebf4220c4e4270596a6ec1fac1823fd3ec7f60d9d7456abf49e",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/39121517468"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "1.3",
      "date": "2026-10-18T11:04:57.000Z",
      "arch": "x86_64",
      "commit": "5a6472869ffbfe20e15f7759406de462d140f269",
      "fileid": "https://r2.ropensci.org/4e1693ac10c797287e3dc7874f815e18c072037eb86cf459aaf1b81bdf7891f2",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/39121517468"
    }
  ]
}