{
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  "Package": "mycolorsTB",
  "Type": "Package",
  "Title": "Color Palettes for Mycobacterium Tuberculosis Data Visualization",
  "Version": "0.1.1",
  "Authors@R": "person(given = \"Paula\",\nfamily = \"Ruiz-Rodriguez\",\nemail  = \"paula.ruiz.rodriguez@csic.es\",\nrole   = c(\"aut\", \"cre\"))",
  "Description": "Colour palettes and helper functions for visualising\nMycobacterium tuberculosis genomic and epidemiological data\nwith 'ggplot2' and 'ggtree'. The package provides predefined\npalettes, scale functions, tree/cladogram helpers, and\nconvenient preview tools to ensure consistent branding in\npathogen-omics visualisations. The palettes were developed as\npart of the 'mycolorsTB' project\n<https://github.com/PathoGenOmics-Lab/mycolorsTB>.",
  "License": "GPL-3",
  "Encoding": "UTF-8",
  "VignetteBuilder": "knitr",
  "RoxygenNote": "7.3.1",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-12 06:56:23 UTC",
    "User": "root"
  },
  "Author": "Paula Ruiz-Rodriguez [aut, cre]",
  "Maintainer": "Paula Ruiz-Rodriguez <paula.ruiz.rodriguez@csic.es>",
  "Repository": "https://cran.r-universe.dev",
  "Date/Publication": "2025-07-16 17:41:57 UTC",
  "RemoteUrl": "https://github.com/cran/mycolorsTB",
  "RemoteRef": "HEAD",
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    "author": "Paula Ruiz-Rodriguez <paula.ruiz.rodriguez@csic.es>",
    "committer": "cran-robot <csardi.gabor+cran@gmail.com>",
    "message": "version 0.1.1\n",
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  "_maintainer": {
    "name": "Paula Ruiz-Rodriguez",
    "email": "paula.ruiz.rodriguez@csic.es"
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  "_dependencies": [
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      "package": "ggplot2",
      "role": "Imports"
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    {
      "package": "ape",
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    {
      "package": "ggtree",
      "role": "Imports"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
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      "role": "Suggests"
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  "_owner": "cran",
  "_selfowned": false,
  "_usedby": 0,
  "_updates": [
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      "week": "2025-29",
      "n": 1
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  ],
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  "_userbio": {
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    "name": "cran",
    "description": "Unofficial read-only mirror of all CRAN R packages"
  },
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    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/mycolorsTB"
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  "_assets": [
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    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
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    "extra/mycolorsTB.html",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
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  "_cranurl": false,
  "_releases": [
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  "_exports": [
    "classicTB",
    "mycolors",
    "pathogenomics",
    "plot_tb_cladogram",
    "plot_tb_tree",
    "scale_color_classicTB",
    "scale_color_mycolors",
    "scale_fill_classicTB",
    "scale_fill_mycolors",
    "tb_palette",
    "view_palette"
  ],
  "_help": [
    {
      "page": "classicTB",
      "title": "ClassicTB Color Palette",
      "topics": [
        "classicTB"
      ]
    },
    {
      "page": "mycolors",
      "title": "Mycolors Color Palette",
      "topics": [
        "mycolors"
      ]
    },
    {
      "page": "pathogenomics",
      "title": "PathoGenOmics Color Palette",
      "topics": [
        "pathogenomics"
      ]
    },
    {
      "page": "plot_tb_cladogram",
      "title": "Plot a Phylogenetic Cladogram with TB Lineage Colors",
      "topics": [
        "plot_tb_cladogram"
      ]
    },
    {
      "page": "plot_tb_tree",
      "title": "Plot a Phylogenetic Tree with TB Lineage Colors",
      "topics": [
        "plot_tb_tree"
      ]
    },
    {
      "page": "scale_color_classicTB",
      "title": "Scale Color for ggplot2 Using classicTB Palette",
      "topics": [
        "scale_color_classicTB"
      ]
    },
    {
      "page": "scale_color_mycolors",
      "title": "Scale Color for ggplot2 Using mycolors Palette",
      "topics": [
        "scale_color_mycolors"
      ]
    },
    {
      "page": "scale_fill_classicTB",
      "title": "Scale Fill for ggplot2 Using classicTB Palette",
      "topics": [
        "scale_fill_classicTB"
      ]
    },
    {
      "page": "scale_fill_mycolors",
      "title": "Scale Fill for ggplot2 Using mycolors Palette",
      "topics": [
        "scale_fill_mycolors"
      ]
    },
    {
      "page": "tb_palette",
      "title": "Generate n colors from a mycolorsTB palette",
      "topics": [
        "tb_palette"
      ]
    },
    {
      "page": "view_palette",
      "title": "Display a color palette",
      "topics": [
        "view_palette"
      ]
    }
  ],
  "_readme": "https://github.com/cran/mycolorsTB/raw/HEAD/README.md",
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    "htmlwidgets",
    "isoband",
    "jquerylib",
    "jsonlite",
    "knitr",
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    "lattice",
    "lazyeval",
    "lifecycle",
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    "MASS",
    "memoise",
    "mime",
    "nlme",
    "patchwork",
    "pillar",
    "pkgconfig",
    "purrr",
    "R6",
    "rappdirs",
    "RColorBrewer",
    "Rcpp",
    "rlang",
    "rmarkdown",
    "S7",
    "sass",
    "scales",
    "stringi",
    "stringr",
    "systemfonts",
    "tibble",
    "tidyr",
    "tidyselect",
    "tidytree",
    "tinytex",
    "treeio",
    "utf8",
    "vctrs",
    "viridisLite",
    "withr",
    "xfun",
    "yaml",
    "yulab.utils"
  ],
  "_vignettes": [
    {
      "source": "use-mycolors.Rmd",
      "filename": "use-mycolors.html",
      "title": "Using mycolorsTB: A Guide and Gallery",
      "author": "Paula Ruiz-Rodriguez",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Introduction",
        "1. Viewing Available Palettes",
        "2. Usage with ggplot2",
        "3. Plotting Trees and Cladograms",
        "Phylogenetic Tree",
        "Cladogram",
        "4. Generating Custom Palettes"
      ],
      "created": "2025-07-16 17:41:57",
      "modified": "2025-07-16 17:41:57",
      "commits": 1
    }
  ],
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