{ "_id": "6a102699acfb0bcc41c8f977", "Package": "mixpower", "Title": "Simulation-Based Power Analysis for Mixed-Effects Models", "Version": "0.1.0", "Authors@R": "person(\"Mixpower\", \"Alex Litovchenko\", role = c(\"aut\", \"cre\"), email = \"al4877@columbia.edu\")", "Description": "A comprehensive, simulation-based toolkit for power and\nsample-size analysis for linear and generalized linear\nmixed-effects models (LMMs and GLMMs). Supports Gaussian,\nbinomial, Poisson, and negative binomial families via 'lme4';\nWald and likelihood-ratio tests; multi-parameter sensitivity\ngrids; power curves and minimum sample-size solvers; parallel\nevaluation with deterministic seeds; and full reproducibility\n(manifests, result bundling, and export to CSV/JSON). Delivers\nthorough diagnostics per run (failure rate, singular-fit rate,\neffective N) and publication-ready summary tables. References:\nBates et al. (2015) \"Fitting Linear Mixed-Effects Models Using\nlme4\" ; Green and MacLeod (2016)\n\"SIMR: an R package for power analysis of generalized linear\nmixed models by simulation\" .", "License": "MIT + file LICENSE", "Encoding": "UTF-8", "Language": "en-US", "RoxygenNote": "7.3.3", "VignetteBuilder": "knitr", "Config/testthat/edition": "3", "URL": "https://github.com/alitovchenko/mixpower", "BugReports": "https://github.com/alitovchenko/mixpower/issues", "NeedsCompilation": "no", "Packaged": { "Date": "2026-05-13 08:50:37 UTC", "User": "root" }, "Author": "Mixpower Alex Litovchenko [aut, cre]", "Maintainer": "Mixpower Alex Litovchenko ", "Repository": "https://cran.r-universe.dev", "Date/Publication": "2026-02-12 08:20:18 UTC", "RemoteUrl": "https://github.com/cran/mixpower", "RemoteRef": "HEAD", "RemoteSha": "e301643423baa6e2b32053dd5159c1ca6fbd453d", "MD5sum": "0652d2d7c8e697e285fb823222a36e2a", "_user": "cran", "_type": "src", "_file": "mixpower_0.1.0.tar.gz", "_fileid": "7d8535a148aebe6412e1ca1508032d16cc194ba0bd2dcb8e60be85859f900ca1", "_filesize": 273166, "_sha256": "7d8535a148aebe6412e1ca1508032d16cc194ba0bd2dcb8e60be85859f900ca1", "_created": "2026-05-13T08:50:37.000Z", "_published": "2026-05-22T09:49:13.985Z", "_distro": "noble", "_jobs": [ { "job": 77355906394, "time": 147, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "6965653333" }, { "job": 77355906496, "time": 155, "config": "linux-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "6965658315" }, { "job": 77355905981, "time": 358, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "6965604853" }, { "job": 77355906091, "time": 103, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7157645284" } ], "_buildurl": "https://github.com/r-universe/cran/actions/runs/25788383210", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/cran/mixpower", "_commit": { "id": "e301643423baa6e2b32053dd5159c1ca6fbd453d", "author": "Mixpower Alex Litovchenko ", "committer": "cran-robot ", "message": "version 0.1.0\n", "time": 1770884418 }, "_maintainer": { "name": "Mixpower Alex Litovchenko", "email": "al4877@columbia.edu" }, "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 4.1.0", "role": "Depends" }, { "package": "stats", "role": "Imports" }, { "package": "lme4", "role": "Imports" }, { "package": "testthat", "version": ">= 3.0.0", "role": "Suggests" }, { "package": "knitr", "role": "Suggests" }, { "package": "rmarkdown", "role": "Suggests" }, { "package": "digest", "role": "Suggests" }, { "package": "jsonlite", "role": "Suggests" } ], "_owner": "cran", "_selfowned": false, "_usedby": 0, "_updates": [ { "week": "2026-07", "n": 1 } ], "_tags": [ { "name": "0.1.0", "date": "2026-02-12" } ], "_stars": 0, "_userbio": { "uuid": 6899542, "type": "organization", "name": "cran", "description": "Unofficial read-only mirror of all CRAN R packages" }, "_downloads": { "count": 207, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/mixpower" }, "_devurl": "https://github.com/alitovchenko/mixpower", "_searchresults": 0, "_rbuild": "4.6.0", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/mixpower.html", "extra/NEWS.html", "extra/NEWS.txt", "extra/readme.html", "extra/readme.md", "manual.pdf" ], "_realowner": "cran", "_cranurl": false, "_releases": [ { "version": "0.1.0", "date": "2026-02-16" } ], "_exports": [ "fit_model", "mp_assumptions", "mp_backend_lme4", "mp_backend_lme4_binomial", "mp_backend_lme4_nb", "mp_backend_lme4_poisson", "mp_bundle_results", "mp_design", "mp_manifest", "mp_power", "mp_power_curve", "mp_power_curve_parallel", "mp_report_table", "mp_scenario", "mp_scenario_lme4", "mp_scenario_lme4_binomial", "mp_scenario_lme4_nb", "mp_scenario_lme4_poisson", "mp_sensitivity", "mp_solve_sample_size", "mp_write_results", "plot_power", "run_parallel", "simulate_glmm_binomial_data", "simulate_glmm_nb_data", "simulate_glmm_poisson_data", "simulate_power", "summarize_simulations", "test_effect" ], "_help": [ { "page": "fit_model", "title": "Fit a model for a single simulated dataset", "topics": [ "fit_model" ] }, { "page": "mp_assumptions", "title": "Create modeling assumptions for simulation-based power", "topics": [ "mp_assumptions" ] }, { "page": "mp_backend_lme4", "title": "Build an lme4 backend for MixPower scenarios", "topics": [ "mp_backend_lme4" ] }, { "page": "mp_backend_lme4_binomial", "title": "Build an lme4 backend for binomial GLMM scenarios", "topics": [ "mp_backend_lme4_binomial" ] }, { "page": "mp_backend_lme4_nb", "title": "Build an lme4 backend for Negative Binomial GLMM scenarios", "topics": [ "mp_backend_lme4_nb" ] }, { "page": "mp_backend_lme4_poisson", "title": "Build an lme4 backend for Poisson GLMM scenarios", "topics": [ "mp_backend_lme4_poisson" ] }, { "page": "mp_bundle_results", "title": "Bundle results with manifest and optional labels", "topics": [ "mp_bundle_results" ] }, { "page": "mp_design", "title": "Create a study design specification", "topics": [ "mp_design" ] }, { "page": "mp_manifest", "title": "Reproducibility manifest for power analyses", "topics": [ "mp_manifest" ] }, { "page": "mp_power", "title": "Simulation-based power estimation (engine-agnostic core)", "topics": [ "mp_power" ] }, { "page": "mp_power_curve", "title": "Power curve for a single design/assumption parameter", "topics": [ "mp_power_curve" ] }, { "page": "mp_power_curve_parallel", "title": "Parallel power curve evaluation", "topics": [ "mp_power_curve_parallel" ] }, { "page": "mp_report_table", "title": "Publication-ready summary table for power results", "topics": [ "mp_report_table" ] }, { "page": "mp_scenario", "title": "Create a power-analysis scenario", "topics": [ "mp_scenario" ] }, { "page": "mp_scenario_lme4", "title": "Create a fully specified MixPower scenario with the lme4 backend", "topics": [ "mp_scenario_lme4" ] }, { "page": "mp_scenario_lme4_binomial", "title": "Create a fully specified MixPower scenario with the binomial lme4 backend", "topics": [ "mp_scenario_lme4_binomial" ] }, { "page": "mp_scenario_lme4_nb", "title": "Create a fully specified MixPower scenario with the NB lme4 backend", "topics": [ "mp_scenario_lme4_nb" ] }, { "page": "mp_scenario_lme4_poisson", "title": "Create a fully specified MixPower scenario with the Poisson lme4 backend", "topics": [ "mp_scenario_lme4_poisson" ] }, { "page": "mp_sensitivity", "title": "Run power sensitivity analysis over a parameter grid", "topics": [ "mp_sensitivity" ] }, { "page": "mp_solve_sample_size", "title": "Solve for minimum sample size achieving target power", "topics": [ "mp_solve_sample_size" ] }, { "page": "mp_write_results", "title": "Write results or bundle to CSV or JSON", "topics": [ "mp_write_results" ] }, { "page": "plot_power", "title": "Plot power results", "topics": [ "plot_power" ] }, { "page": "plot.mp_power_curve", "title": "Plot a power curve", "topics": [ "plot.mp_power_curve" ] }, { "page": "plot.mp_sensitivity", "title": "Plot a one-dimensional sensitivity curve", "topics": [ "plot.mp_sensitivity" ] }, { "page": "run_parallel", "title": "Placeholder for parallel execution", "topics": [ "run_parallel" ] }, { "page": "simulate_glmm_binomial_data", "title": "Simulate binary outcome data for a GLMM with random intercepts", "topics": [ "simulate_glmm_binomial_data" ] }, { "page": "simulate_glmm_nb_data", "title": "Simulate count outcome data for a Negative Binomial GLMM", "topics": [ "simulate_glmm_nb_data" ] }, { "page": "simulate_glmm_poisson_data", "title": "Simulate count outcome data for a Poisson GLMM with random intercepts", "topics": [ "simulate_glmm_poisson_data" ] }, { "page": "simulate_power", "title": "Run a simple simulation-based power study", "topics": [ "simulate_power" ] }, { "page": "summarize_simulations", "title": "Summarize simulation outputs", "topics": [ "summarize_simulations" ] }, { "page": "test_effect", "title": "Extract a test statistic for a model term", "topics": [ "test_effect" ] } ], "_readme": "https://github.com/cran/mixpower/raw/HEAD/README.md", "_rundeps": [ "boot", "lattice", "lme4", "MASS", "Matrix", "minqa", "nlme", "nloptr", "rbibutils", "Rcpp", "RcppEigen", "Rdpack", "reformulas", "rlang" ], "_vignettes": [ { "source": "mixpower-design.Rmd", "filename": "mixpower-design.html", "title": "Designing studies", "engine": "knitr::rmarkdown", "headings": [], "created": "2026-02-12 08:20:18", "modified": "2026-02-12 08:20:18", "commits": 1 }, { "source": "mixpower-diagnostics.Rmd", "filename": "mixpower-diagnostics.html", "title": "Diagnostics and sensitivity", "engine": "knitr::rmarkdown", "headings": [], "created": "2026-02-12 08:20:18", "modified": "2026-02-12 08:20:18", "commits": 1 }, { "source": "mixpower-intro.Rmd", "filename": "mixpower-intro.html", "title": "mixpower intro", "engine": "knitr::rmarkdown", "headings": [ "Inference options: Wald vs LRT", "Binary outcomes (binomial GLMM)", "Sensitivity curve for binomial outcomes", "Count outcomes (Poisson vs Negative Binomial)", "Sensitivity curves (count outcomes)" ], "created": "2026-02-12 08:20:18", "modified": "2026-02-12 08:20:18", "commits": 1 }, { "source": "mixpower-reproducibility.Rmd", "filename": "mixpower-reproducibility.html", "title": "Reproducibility workflow", "engine": "knitr::rmarkdown", "headings": [ "Run analysis and capture manifest", "Bundle results and export", "Regenerating from manifest and seed", "One-row manifest for saving" ], "created": "2026-02-12 08:20:18", "modified": "2026-02-12 08:20:18", "commits": 1 }, { "source": "mixpower-simulations.Rmd", "filename": "mixpower-simulations.html", "title": "Running simulations", "engine": "knitr::rmarkdown", "headings": [], "created": "2026-02-12 08:20:18", "modified": "2026-02-12 08:20:18", "commits": 1 } ], "_score": 3.3979400086720375, "_indexed": true, "_nocasepkg": "mixpower", "_universes": [ "cran", "alitovchenko" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "0.1.0", "date": "2026-05-13T08:52:48.000Z", "distro": "noble", "commit": "e301643423baa6e2b32053dd5159c1ca6fbd453d", "fileid": "cd0bc6a8e74ce5cc299e7314d48c64cf66846d0432303369f3652150f904e277", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/25788383210" }, { "r": "4.6.0", "os": "linux", "version": "0.1.0", "date": "2026-05-13T08:53:05.000Z", "distro": "noble", "commit": "e301643423baa6e2b32053dd5159c1ca6fbd453d", "fileid": "f50720d402580a2d52f471892f66ae0d7c74ec2129ef5a16fbf9b088e5259eea", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/25788383210" }, { "r": "4.6.0", "os": "wasm", "version": "0.1.0", "date": "2026-05-22T09:49:02.000Z", "commit": "e301643423baa6e2b32053dd5159c1ca6fbd453d", "fileid": "0b0c57cf71dd015aa3d2bdcdd85ff63c3f602cd6ac8c4b67969180e2fb79b4d0", "status": "success", "buildurl": "https://github.com/r-universe/cran/actions/runs/25788383210" } ] }