{ "_id": "6ad13bead3c80a766859b9d1", "Package": "limestab", "Type": "Package", "Title": "Stable Local Interpretable Model-Agnostic Explanations (LIME,\nOptiLIME, BayLIME, ALIME)", "Version": "0.1.0", "Authors@R": "c(\nperson(\"Simay\", \"Toparlak\",\nemail = \"simay.toparlak@metu.edu.tr\",\nrole = c(\"aut\"),\ncomment = c(affiliation = \"Department of Biomedical Engineering, Middle East Technical University\")),\nperson(\"Vilda\", \"Purutcuoglu\",\nemail = \"vpurutcu@metu.edu.tr\",\nrole = c(\"aut\", \"cre\"),\ncomment = c(affiliation = \"Department of Statistics, Middle East Technical University\")))", "Description": "Provides four local explanation methods for tabular data:\nLIME, OptiLIME, BayLIME, and ALIME, together with the stability\nmetrics used to compare them across repeated explanations of\nthe same instance: the Coefficient Stability Index (CSI), the\nVariable Stability Index (VSI), Median Rank Matching Stability\n(MRMS), Point-Based Stability Index (PCSI), and Interval\nCoefficient Stability Index (ICSI). The methodology accompanies\nToparlak and Purutcuoglu, \"A Median-Based Framework for\nAssessing the Stability in XAI Tools\" (manuscript under\nrevision); the citation will be updated upon publication.", "License": "MIT + file LICENSE", "Encoding": "UTF-8", "Config/testthat/edition": "3", "Config/roxygen2/version": "8.1.0", "NeedsCompilation": "no", "Packaged": { "Date": "2026-10-15 20:44:31 UTC", "User": "root" }, "Author": "Simay Toparlak [aut] (affiliation: Department of Biomedical\nEngineering, Middle East Technical University), Vilda\nPurutcuoglu [aut, cre] (affiliation: Department of Statistics,\nMiddle East Technical University)", "Maintainer": "Vilda Purutcuoglu ", "Repository": "https://cran.r-universe.dev", "Date/Publication": "2026-10-15 16:30:12 UTC", "RemoteUrl": "https://github.com/cran/limestab", "RemoteRef": "HEAD", "RemoteSha": "bafba625b4d72e0b4bd54c7ac34f57c5c7e49886", "_user": "cran", "_type": "src", "_file": "limestab_0.1.0.tar.gz", "_fileid": "https://r2.ropensci.org/cdd250e37b15b0b6c80f454c02402b6ad73f5bd16019b53875b809c72973f677", "_filesize": 169004, "_sha256": "cdd250e37b15b0b6c80f454c02402b6ad73f5bd16019b53875b809c72973f677", "_expires": "2027-01-23T20:47:35.000Z", "_created": "2026-10-15T20:44:31.000Z", "_published": "2026-10-15T20:47:38.177Z", "_buildurl": "https://github.com/r-universe/cran/actions/runs/38803960005", "_status": "success", "_host": "GitHub-Actions", "_jobs": [ { "job": 116661500646, "time": 142, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "12004939832" }, { "job": 116661500607, "time": 103, "config": "linux-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "12006275718" }, { "job": 116660040121, "time": 188, "config": "source", "r": "4.6.1", "check": "OK", "artifact": "12004977950" }, { "job": 116661500581, "time": 93, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "12005217885" }, { "job": 116661500635, "time": 82, "config": "windows-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "12006590273" }, { "job": 116661500814, "time": 92, "config": "windows-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "12005092915" } ], "_upstream": "https://github.com/cran/limestab", "_commit": { "id": "bafba625b4d72e0b4bd54c7ac34f57c5c7e49886", "author": "Vilda Purutcuoglu ", "committer": "cran-robot ", "message": "version 0.1.0\n", "time": 1792081812 }, "_maintainer": { "name": "Vilda Purutcuoglu", "email": "vpurutcu@metu.edu.tr" }, "_distro": "resolute", "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 3.6", "role": "Depends" }, { "package": "stats", "role": "Imports" }, { "package": "utils", "role": "Imports" }, { "package": "xgboost", "role": "Suggests" }, { "package": "testthat", "version": ">= 3.0.0", "role": "Suggests" } ], "_owner": "cran", "_selfowned": false, "_usedby": 0, "_updates": [ { "week": "2026-42", "n": 1 } ], "_tags": [ { "name": "0.1.0", "date": "2026-10-15" } ], "_stars": 0, "_userbio": { "uuid": 6899542, "type": "organization", "name": "cran", "followers": 631, "description": "Unofficial read-only mirror of all CRAN R packages" }, "_downloads": { "count": 0, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/limestab" }, "_searchresults": 0, "_rbuild": "4.6.1", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/limestab.html", "extra/manual.pdf", "extra/readme.html", "extra/readme.md", "LICENSE" ], "_cranurl": false, "_releases": [ { "version": "0.1.0", "date": "2026-10-15" } ], "_exports": [ "alime_explain_instance", "alime_explainer", "bayesian_optimisation", "bayesian_ridge_fit", "baylime_explain_instance", "baylime_explainer", "calculate_distances", "compute_cov_metrics", "compute_csi", "compute_icsi", "compute_mad_stdevs", "compute_mrms", "compute_pcsi", "compute_vsi", "compute_wls_stdevs", "default_kernel_width", "fit_gp", "fit_weighted_ridge", "generate_perturbations", "lime_check_stability", "lime_confidence_intervals", "lime_explain_instance", "lime_explainer", "lime_kernel", "optilime", "optilime_score", "select_features", "weighted_r2" ], "_help": [ { "page": "limestab-package", "title": "limestab: Stable LIME, OptiLIME, BayLIME and ALIME", "topics": [ "limestab-package", "limestab" ] }, { "page": "alime_explain_instance", "title": "Explain a single instance with ALIME", "topics": [ "alime_explain_instance" ] }, { "page": "alime_explainer", "title": "Create an ALIME explainer", "topics": [ "alime_explainer" ] }, { "page": "bayesian_optimisation", "title": "Bayesian optimisation of a scalar objective", "topics": [ "bayesian_optimisation" ] }, { "page": "bayesian_ridge_fit", "title": "Bayesian ridge regression (Tipping 2001 / MacKay 1992)", "topics": [ "bayesian_ridge_fit" ] }, { "page": "baylime_explain_instance", "title": "Explain a single instance with BayLIME", "topics": [ "baylime_explain_instance" ] }, { "page": "baylime_explainer", "title": "Create a BayLIME explainer", "topics": [ "baylime_explainer" ] }, { "page": "calculate_distances", "title": "Euclidean distance of every row to an instance", "topics": [ "calculate_distances" ] }, { "page": "compute_cov_metrics", "title": "Coefficient-of-variation metrics across repeated runs", "topics": [ "compute_cov_metrics" ] }, { "page": "compute_csi", "title": "Coefficient Stability Index (CSI)", "topics": [ "compute_csi" ] }, { "page": "compute_icsi", "title": "Interval-Based Coefficient Stability Index (ICSI)", "topics": [ "compute_icsi" ] }, { "page": "compute_mad_stdevs", "title": "Robust standard deviation from repeated coefficients", "topics": [ "compute_mad_stdevs" ] }, { "page": "compute_mrms", "title": "Median Rank Matching Stability of features across repeated runs", "topics": [ "compute_mrms" ] }, { "page": "compute_pcsi", "title": "PCSI stability indices", "topics": [ "compute_pcsi" ] }, { "page": "compute_vsi", "title": "Variable Stability Index (VSI)", "topics": [ "compute_vsi" ] }, { "page": "compute_wls_stdevs", "title": "Standard deviations of weighted ridge coefficients", "topics": [ "compute_wls_stdevs" ] }, { "page": "default_kernel_width", "title": "Default LIME kernel width for tabular data", "topics": [ "default_kernel_width" ] }, { "page": "fit_gp", "title": "Fit a 1-D Gaussian process (Matern 3/2 kernel)", "topics": [ "fit_gp" ] }, { "page": "fit_weighted_ridge", "title": "Weighted ridge regression with an unpenalised intercept", "topics": [ "fit_weighted_ridge" ] }, { "page": "generate_perturbations", "title": "Generate a perturbed neighbourhood in standardised feature space", "topics": [ "generate_perturbations" ] }, { "page": "lime_check_stability", "title": "Repeat an explanation and compute every stability metric", "topics": [ "lime_check_stability" ] }, { "page": "lime_confidence_intervals", "title": "Confidence intervals for a LIME-style explanation", "topics": [ "lime_confidence_intervals" ] }, { "page": "lime_explain_instance", "title": "Explain a single instance with LIME", "topics": [ "lime_explain_instance" ] }, { "page": "lime_explainer", "title": "Create a LIME explainer", "topics": [ "lime_explainer" ] }, { "page": "lime_kernel", "title": "LIME exponential kernel", "topics": [ "lime_kernel" ] }, { "page": "optilime", "title": "OptiLIME: choose the LIME kernel width by Bayesian optimisation", "topics": [ "optilime" ] }, { "page": "optilime_score", "title": "OptiLIME objective (reflected local R-squared)", "topics": [ "optilime_score" ] }, { "page": "predict.optilime_gp", "title": "Predict method for optilime_gp objects", "topics": [ "predict.optilime_gp" ] }, { "page": "select_features", "title": "Select the features used by a LIME-style local model", "topics": [ "select_features" ] }, { "page": "weighted_r2", "title": "Weighted R-squared", "topics": [ "weighted_r2" ] } ], "_readme": "https://github.com/cran/limestab/raw/HEAD/README.md", "_rundeps": [], "_score": 1.6989700043360187, "_indexed": true, "_nocasepkg": "limestab", "_universes": [ "cran" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "0.1.0", "date": "2026-10-15T20:47:01.000Z", "distro": "resolute", "commit": "bafba625b4d72e0b4bd54c7ac34f57c5c7e49886", "fileid": "https://r2.ropensci.org/6799e6b017d07efdfa99cc4b45395008b6bdf29fb4695328ad172b7187a7c260", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/38803960005" }, { "r": "4.6.1", "os": "linux", "version": "0.1.0", "date": "2026-10-15T20:46:22.000Z", "distro": "resolute", "commit": "bafba625b4d72e0b4bd54c7ac34f57c5c7e49886", "fileid": "https://r2.ropensci.org/3be48b5d8f40768d5ea72fb1c3d0786bc7aa2ec4c962022cb2bd4d50d996011c", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/38803960005" }, { "r": "4.6.0", "os": "wasm", "version": "0.1.0", "date": "2026-10-15T20:46:25.000Z", "commit": "bafba625b4d72e0b4bd54c7ac34f57c5c7e49886", "fileid": "https://r2.ropensci.org/6e774eb5c339121d1b61a0657d9e217dc910835b61d7eeb36541ca8b2285cb8f", "status": "success", "buildurl": "https://github.com/r-universe/cran/actions/runs/38803960005" }, { "r": "4.7.0", "os": "win", "version": "0.1.0", "date": "2026-10-15T20:45:55.000Z", "commit": "bafba625b4d72e0b4bd54c7ac34f57c5c7e49886", "fileid": "https://r2.ropensci.org/c3d92c692be540ac7188dd6cad6e40024061b283785a04e61966f4c8326e62bf", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/38803960005" }, { "r": "4.6.1", "os": "win", "version": "0.1.0", "date": "2026-10-15T20:45:56.000Z", "commit": "bafba625b4d72e0b4bd54c7ac34f57c5c7e49886", "fileid": "https://r2.ropensci.org/d9b3a910926a74ce6afe0391b056381be1f69021ee5efb9528f6bb8083a98afa", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/38803960005" } ] }