{
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  "Package": "iSTAY",
  "Type": "Package",
  "Title": "Information-Based Stability and Synchrony Measures",
  "Version": "1.0.0",
  "Date": "2025-10-16",
  "Author": "Anne Chao [aut, cre], Yu-Ting Huang [aut], Johnny Shia [aut]",
  "Maintainer": "Anne Chao <chao@stat.nthu.edu.tw>",
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  "Description": "Provides functions to to compute a continuum of\ninformation-based measures for quantifying the temporal\nstability of populations, communities, and ecosystems, as well\nas their associated synchrony, based on species (or species\nassemblage) biomass or other key variables. When biodiversity\ndata are available, the package also enables the assessment of\nthe corresponding diversity–stability relationships. All\nmeasures are applicable in both temporal and spatial contexts.\nThe theoretical and methodological background is detailed in\nChao et al. (2025) <doi:10.1101/2025.08.20.671203>.",
  "License": "GPL (>= 3)",
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  "Date/Publication": "2025-10-28 08:30:02 UTC",
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      "title": "Information-based stability and synchrony measures.",
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        "iSTAY"
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      "title": "Biomass time series data of 20 sets of plots in the Jena experiment",
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      "title": "Biomass time series data of 76 sets of populations in the Jena experiment",
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      "title": "Four-level hierarchical structure of the Jena Experiment",
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      "page": "ggiSTAY_analysis",
      "title": "ggplot2 extension for plotting diversity–stability and diversity–synchrony relationships.",
      "topics": [
        "ggiSTAY_analysis"
      ]
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      "title": "ggplot2 extension for plotting stability and synchrony profiles.",
      "topics": [
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    {
      "page": "iSTAY_Hier",
      "title": "Calculate stability and synchrony at each hierarchical level",
      "topics": [
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    },
    {
      "page": "iSTAY_Multiple",
      "title": "Calculate stability and synchrony for multiple time series.",
      "topics": [
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    {
      "page": "iSTAY_Single",
      "title": "Calculate stability for a single time series.",
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  "_vignettes": [
    {
      "source": "iStay.Rmd",
      "filename": "iStay.html",
      "title": "An Introductory Vignette for iSTAY Through Examples",
      "author": "Anne Chao, Yu-Ting Hwang, and Johnny Shia",
      "engine": "knitr::rmarkdown",
      "headings": [
        "How to cite",
        "Software needed to run iSTAY in R",
        "How to run iSTAY:",
        "FIVE MAIN FUNCTIONS:",
        "Datasets Provided with the 'iSTAY' package",
        "Data Convertion",
        "Data for 76 individual plots",
        "Data for 462 individual populations",
        "Data for hierarchical structure data",
        "Example 1: Comparing the stability profiles for two selected individual plots",
        "Example 2: Assessing the diversity-stability relationships based on 76 individual plots",
        "Example 3: Comparing the stability profiles for two selected individual populations",
        "Example 4: Assessing the diversity-stability relationships based on 462 individual populations",
        "Example 5: Comparing the gamma, alpha, and beta stability profiles, as well as the synchrony profiles for two selected metacommunities",
        "Example 6: Assessing the relationships between diversity and gamma, alpha, and beta stability, as well as synchrony, based on 20 metacommunities",
        "Exammple 7: Comparing the gamma, alpha, and beta stability profiles, as well as the synchrony profiles in two selected metapopulations",
        "Exammple 8: Assessing the relationships between diversity and gamma, alpha, and beta stability, as well as synchrony, based on 76 metapopulations",
        "Example 9: Plotting stability and synchrony profiles at each hierarchical level",
        "References"
      ],
      "created": "2025-10-28 08:30:02",
      "modified": "2025-10-28 08:30:02",
      "commits": 1
    }
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