{ "_id": "6a1d60191d7bb097a0a49c80", "Package": "iCAMP", "Type": "Package", "Title": "Infer Community Assembly Mechanisms by Phylogenetic-Bin-Based\nNull Model Analysis", "Version": "1.5.12", "Date": "2022-5-29", "Author": "Daliang Ning", "Maintainer": "Daliang Ning ", "Description": "To implement a general framework to quantitatively infer\nCommunity Assembly Mechanisms by Phylogenetic-bin-based null\nmodel analysis, abbreviated as 'iCAMP' (Ning et al 2020)\n. It can quantitatively assess\nthe relative importance of different community assembly\nprocesses, such as selection, dispersal, and drift, for both\ncommunities and each phylogenetic group ('bin'). Each bin\nusually consists of different taxa from a family or an order.\nThe package also provides functions to implement some other\npublished methods, including neutral taxa percentage (Burns et\nal 2016) based on neutral theory\nmodel and quantifying assembly processes based on\nentire-community null models ('QPEN', Stegen et al 2013)\n. It also includes some handy\nfunctions, particularly for big datasets, such as phylogenetic\nand taxonomic null model analysis at both community and bin\nlevels, between-taxa niche difference and phylogenetic distance\ncalculation, phylogenetic signal test within phylogenetic\ngroups, midpoint root of big trees, etc. Version 1.3.x mainly\nimproved the function for 'QPEN' and added function\n'icamp.cate()' to summarize 'iCAMP' results for different\ncategories of taxa (e.g. core versus rare taxa).", "License": "GPL-2", "URL": "https://github.com/DaliangNing/iCAMP1", "NeedsCompilation": "no", "Packaged": { "Date": "2026-06-01 10:29:41 UTC", "User": "root" }, "Repository": "https://cran.r-universe.dev", "Date/Publication": "2022-06-01 07:00:02 UTC", "RemoteUrl": "https://github.com/cran/iCAMP", "RemoteRef": "HEAD", "RemoteSha": "e9566a8dc121f0f773c176463355439071dedfb3", "MD5sum": "d5c863d5fe35a15f7409c0e8ba980b79", "_user": "cran", "_type": "src", "_file": "iCAMP_1.5.12.tar.gz", 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"e9566a8dc121f0f773c176463355439071dedfb3", "author": "Daliang Ning ", "committer": "cran-robot ", "message": "version 1.5.12\n", "time": 1654066802 }, "_maintainer": { "name": "Daliang Ning", "email": "ningdaliang@ou.edu" }, "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 3.5", "role": "Depends" }, { "package": "vegan", "role": "Imports" }, { "package": "parallel", "role": "Imports" }, { "package": "permute", "role": "Imports" }, { "package": "ape", "role": "Imports" }, { "package": "bigmemory", "role": "Imports" }, { "package": "nortest", "role": "Imports" }, { "package": "minpack.lm", "role": "Imports" }, { "package": "Hmisc", "role": "Imports" }, { "package": "stats4", "role": "Imports" }, { "package": "DirichletReg", "role": "Imports" }, { "package": "data.table", "role": "Imports" } ], "_owner": "cran", "_selfowned": false, "_usedby": 1, "_updates": [], "_tags": [], "_stars": 2, "_userbio": { "uuid": 6899542, "type": "organization", "name": "cran", 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