{
  "_id": "6a2536a04b233be198397571",
  "Package": "glmm",
  "Type": "Package",
  "Title": "Generalized Linear Mixed Models via Monte Carlo Likelihood\nApproximation",
  "Version": "1.4.5",
  "Date": "2024-09-20",
  "Authors@R": "c(person(\"Christina\", \"Knudson\", role = c(\"aut\", \"cre\"),\nemail = \"drchristinaknudson@gmail.com\"), person(\"Charles J.\", \"Geyer\", role = \"ctb\",\nemail = \"geyer@umn.edu\"), person(\"Sydney\", \"Benson\", role = \"ctb\", email = \"bens0643@umn.edu\"))",
  "Maintainer": "Christina Knudson <drchristinaknudson@gmail.com>",
  "Description": "Approximates the likelihood of a generalized linear mixed\nmodel using Monte Carlo likelihood approximation. Then\nmaximizes the likelihood approximation to return maximum\nlikelihood estimates, observed Fisher information, and other\nmodel information.",
  "License": "GPL-2",
  "ByteCompile": "TRUE",
  "NeedsCompilation": "yes",
  "RoxygenNote": "7.0.2",
  "VignetteBuilder": "knitr",
  "Packaged": {
    "Date": "2026-06-07 09:10:54 UTC",
    "User": "root"
  },
  "Author": "Christina Knudson [aut, cre], Charles J. Geyer [ctb], Sydney\nBenson [ctb]",
  "Repository": "https://cran.r-universe.dev",
  "Date/Publication": "2024-09-23 03:00:25 UTC",
  "RemoteUrl": "https://github.com/cran/glmm",
  "RemoteRef": "HEAD",
  "RemoteSha": "ebacdba823202779784d2b8bc4cb9130956cf484",
  "MD5sum": "bf69c954dd4b5f897bd6845abf54b34c",
  "_user": "cran",
  "_type": "src",
  "_file": "glmm_1.4.5.tar.gz",
  "_fileid": "7de957c794ae3bd677b57043220db824c5b9bded0c6594b1e36b68aeb8247955",
  "_filesize": 766886,
  "_sha256": "7de957c794ae3bd677b57043220db824c5b9bded0c6594b1e36b68aeb8247955",
  "_created": "2026-06-07T09:10:54.000Z",
  "_published": "2026-06-07T09:15:12.308Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 79946944158,
      "time": 204,
      "config": "linux-devel-arm64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7462710928"
    },
    {
      "job": 79946944156,
      "time": 193,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7462709067"
    },
    {
      "job": 79946944150,
      "time": 200,
      "config": "linux-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7462710531"
    },
    {
      "job": 79946944138,
      "time": 214,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7462712101"
    },
    {
      "job": 79946745136,
      "time": 185,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7462681018"
    },
    {
      "job": 79946944134,
      "time": 103,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7462696406"
    }
  ],
  "_buildurl": "https://github.com/r-universe/cran/actions/runs/27088212517",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/cran/glmm",
  "_commit": {
    "id": "ebacdba823202779784d2b8bc4cb9130956cf484",
    "author": "Christina Knudson <drchristinaknudson@gmail.com>",
    "committer": "cran-robot <csardi.gabor+cran@gmail.com>",
    "message": "version 1.4.5\n",
    "time": 1727060425
  },
  "_maintainer": {
    "name": "Christina Knudson",
    "email": "drchristinaknudson@gmail.com",
    "login": "knudson1",
    "description": "PhD in Statistics. Data Scientist. \n",
    "uuid": 7234150
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 4.0",
      "role": "Depends"
    },
    {
      "package": "trust",
      "role": "Depends"
    },
    {
      "package": "mvtnorm",
      "role": "Depends"
    },
    {
      "package": "Matrix",
      "role": "Depends"
    },
    {
      "package": "parallel",
      "role": "Depends"
    },
    {
      "package": "doParallel",
      "role": "Depends"
    },
    {
      "package": "stats",
      "role": "Imports"
    },
    {
      "package": "foreach",
      "role": "Imports"
    },
    {
      "package": "itertools",
      "role": "Imports"
    },
    {
      "package": "utils",
      "role": "Imports"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "V8",
      "role": "Suggests"
    }
  ],
  "_owner": "cran",
  "_selfowned": false,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_stars": 2,
  "_contributors": [
    {
      "user": "knudson1",
      "count": 7,
      "uuid": 7234150
    }
  ],
  "_userbio": {
    "uuid": 6899542,
    "type": "organization",
    "name": "cran",
    "description": "Unofficial read-only mirror of all CRAN R packages"
  },
  "_downloads": {
    "count": 672,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/glmm"
  },
  "_mentions": 32,
  "_searchresults": 264,
  "_topics": [
    "openblas"
  ],
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/glmm.html",
    "manual.pdf"
  ],
  "_realowner": "knudson1",
  "_cranurl": false,
  "_releases": [
    {
      "version": "1.0",
      "date": "2015-02-11"
    },
    {
      "version": "1.0.1",
      "date": "2015-02-12"
    },
    {
      "version": "1.0.2",
      "date": "2015-03-19"
    },
    {
      "version": "1.0.3",
      "date": "2015-04-28"
    },
    {
      "version": "1.0.4",
      "date": "2015-07-24"
    },
    {
      "version": "1.1.0",
      "date": "2016-08-13"
    },
    {
      "version": "1.1.1",
      "date": "2016-08-17"
    },
    {
      "version": "1.2",
      "date": "2017-07-25"
    },
    {
      "version": "1.2.1",
      "date": "2017-08-16"
    },
    {
      "version": "1.2.2",
      "date": "2017-11-07"
    },
    {
      "version": "1.2.3",
      "date": "2018-02-22"
    },
    {
      "version": "1.3.0",
      "date": "2018-12-11"
    },
    {
      "version": "1.4",
      "date": "2020-05-31"
    },
    {
      "version": "1.4.2",
      "date": "2020-06-21"
    },
    {
      "version": "1.4.3",
      "date": "2022-04-07"
    },
    {
      "version": "1.4.4",
      "date": "2022-10-09"
    },
    {
      "version": "1.4.5",
      "date": "2024-09-22"
    }
  ],
  "_exports": [
    "bernoulli.glmm",
    "binomial.glmm",
    "coef.glmm",
    "glmm",
    "logLik.glmm",
    "mcse",
    "mcvcov",
    "poisson.glmm",
    "se",
    "summary.glmm",
    "varcomps",
    "vcov.glmm"
  ],
  "_datasets": [
    {
      "name": "bacteria",
      "title": "Presence of Bacteria after Drug Treatments",
      "object": "bacteria",
      "file": "bacteria.rda",
      "class": [
        "data.frame"
      ],
      "fields": [
        "y",
        "ap",
        "hilo",
        "week",
        "ID",
        "trt",
        "y2"
      ],
      "rows": 220,
      "table": true,
      "tojson": true
    },
    {
      "name": "Booth2",
      "title": "A Logit-Normal GLMM Dataset",
      "object": "Booth2",
      "file": "Booth2.rda",
      "class": [
        "data.frame"
      ],
      "fields": [
        "y",
        "x1",
        "z1",
        "z2"
      ],
      "rows": 150,
      "table": true,
      "tojson": true
    },
    {
      "name": "BoothHobert",
      "title": "A Logit-Normal GLMM Dataset from Booth and Hobert",
      "object": "BoothHobert",
      "file": "BoothHobert.rda",
      "class": [
        "data.frame"
      ],
      "fields": [
        "y",
        "x1",
        "z1"
      ],
      "rows": 150,
      "table": true,
      "tojson": true
    },
    {
      "name": "cbpp2",
      "title": "Contagious Bovine Pleuropneumonia",
      "object": "cbpp2",
      "file": "cbpp2.rda",
      "class": [
        "data.frame"
      ],
      "fields": [
        "Y",
        "period",
        "herd"
      ],
      "rows": 842,
      "table": true,
      "tojson": true
    },
    {
      "name": "murder",
      "title": "Number of Homicide Victims Known",
      "object": "murder",
      "file": "murder.rda",
      "class": [
        "data.frame"
      ],
      "fields": [
        "y",
        "race",
        "black",
        "white"
      ],
      "rows": 1308,
      "table": true,
      "tojson": true
    },
    {
      "name": "radish2",
      "title": "Radish count data set",
      "object": "radish2",
      "file": "radish2.rda",
      "class": [
        "data.frame"
      ],
      "fields": [
        "Site",
        "Block",
        "Region",
        "Pop",
        "varb",
        "resp",
        "id"
      ],
      "rows": 233,
      "table": true,
      "tojson": true
    },
    {
      "name": "salamander",
      "title": "Salamander mating data set from McCullagh and Nelder (1989)",
      "object": "salamander",
      "file": "salamander.rda",
      "class": [
        "data.frame"
      ],
      "fields": [
        "Mate",
        "Cross",
        "Female",
        "Male"
      ],
      "rows": 360,
      "table": true,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "bacteria",
      "title": "Presence of Bacteria after Drug Treatments",
      "topics": [
        "bacteria"
      ]
    },
    {
      "page": "bernoulli.glmm",
      "title": "Functions for the Bernoulli family.",
      "concept": [
        "generalized linear mixed model",
        "Monte Carlo",
        "likelihood approximation"
      ],
      "topics": [
        "bernoulli.glmm"
      ]
    },
    {
      "page": "binomial.glmm",
      "title": "Functions for the Binomial family.",
      "concept": [
        "generalized linear mixed model",
        "Monte Carlo",
        "likelihood approximation"
      ],
      "topics": [
        "binomial.glmm"
      ]
    },
    {
      "page": "Booth2",
      "title": "A Logit-Normal GLMM Dataset",
      "concept": [
        "generalized linear mixed model"
      ],
      "topics": [
        "Booth2"
      ]
    },
    {
      "page": "BoothHobert",
      "title": "A Logit-Normal GLMM Dataset from Booth and Hobert",
      "concept": [
        "generalized linear mixed model"
      ],
      "topics": [
        "BoothHobert"
      ]
    },
    {
      "page": "cbpp2",
      "title": "Contagious Bovine Pleuropneumonia",
      "topics": [
        "cbpp2"
      ]
    },
    {
      "page": "coef.glmm",
      "title": "Extract Model Coefficients",
      "concept": [
        "generalized linear mixed model"
      ],
      "topics": [
        "coef.glmm"
      ]
    },
    {
      "page": "confint.glmm",
      "title": "Calculates Asymptotic Confidence Intervals",
      "concept": [
        "generalized linear mixed model"
      ],
      "topics": [
        "confint.glmm"
      ]
    },
    {
      "page": "glmm",
      "title": "Fitting Generalized Linear Mixed Models using MCML",
      "concept": [
        "generalized linear mixed model",
        "Monte Carlo",
        "maximum likelihood",
        "likelihood approximation"
      ],
      "topics": [
        "glmm"
      ]
    },
    {
      "page": "logLik",
      "title": "Monte Carlo Log Likelihood",
      "concept": [
        "generalized linear mixed model",
        "Monte Carlo",
        "likelihood approximation"
      ],
      "topics": [
        "logLik.glmm"
      ]
    },
    {
      "page": "mcse",
      "title": "Monte Carlo Standard Error",
      "concept": [
        "generalized linear mixed model",
        "Monte Carlo",
        "maximum likelihood"
      ],
      "topics": [
        "mcse"
      ]
    },
    {
      "page": "mcvcov",
      "title": "Monte Carlo Variance Covariance Matrix",
      "concept": [
        "generalized linear mixed model",
        "Monte Carlo",
        "likelihood approximation"
      ],
      "topics": [
        "mcvcov"
      ]
    },
    {
      "page": "murder",
      "title": "Number of Homicide Victims Known",
      "concept": [
        "generalized linear mixed model"
      ],
      "topics": [
        "murder"
      ]
    },
    {
      "page": "poisson.glmm",
      "title": "Functions for the Poisson family.",
      "concept": [
        "generalized linear mixed model",
        "Monte Carlo",
        "likelihood approximation"
      ],
      "topics": [
        "poisson.glmm"
      ]
    },
    {
      "page": "radish2",
      "title": "Radish count data set",
      "concept": [
        "generalized linear mixed model"
      ],
      "topics": [
        "radish2"
      ]
    },
    {
      "page": "salamander",
      "title": "Salamander mating data set from McCullagh and Nelder (1989)",
      "concept": [
        "generalized linear mixed model"
      ],
      "topics": [
        "salamander"
      ]
    },
    {
      "page": "se",
      "title": "Standard Error",
      "concept": [
        "generalized linear mixed model"
      ],
      "topics": [
        "se"
      ]
    },
    {
      "page": "summary.glmm",
      "title": "Summarizing GLMM Fits",
      "concept": [
        "generalized linear mixed model",
        "Monte Carlo",
        "maximum likelihood"
      ],
      "topics": [
        "print.summary.glmm",
        "summary.glmm"
      ]
    },
    {
      "page": "varcomps.glmm",
      "title": "Extract Model Variance Components",
      "concept": [
        "generalized linear mixed model"
      ],
      "topics": [
        "varcomps"
      ]
    },
    {
      "page": "vcov.glmm",
      "title": "Variance-Covariance Matrix",
      "concept": [
        "generalized linear mixed model"
      ],
      "topics": [
        "vcov.glmm"
      ]
    }
  ],
  "_rundeps": [
    "codetools",
    "doParallel",
    "foreach",
    "iterators",
    "itertools",
    "lattice",
    "Matrix",
    "mvtnorm",
    "trust"
  ],
  "_sysdeps": [
    {
      "shlib": "liblapack",
      "package": "libopenblas0-pthread",
      "source": "openblas",
      "version": "0.3.26+ds-1ubuntu0.1",
      "name": "openblas",
      "homepage": "https://www.openblas.net/",
      "description": "Optimized BLAS (linear algebra) library (shared lib, pthread)"
    },
    {
      "shlib": "libblas",
      "package": "libopenblas0-pthread",
      "source": "openblas",
      "version": "0.3.26+ds-1ubuntu0.1",
      "name": "openblas",
      "homepage": "https://www.openblas.net/",
      "description": "Optimized BLAS (linear algebra) library (shared lib, pthread)"
    }
  ],
  "_vignettes": [
    {
      "source": "vignettes.Rnw",
      "filename": "vignettes.pdf",
      "title": "author2019mypaper",
      "engine": "utils::Sweave",
      "headings": [],
      "created": "2022-04-07 06:42:36",
      "modified": "2022-04-07 06:42:36",
      "commits": 1
    }
  ],
  "_score": 4.722633922533812,
  "_indexed": false,
  "_nocasepkg": "glmm",
  "_universes": [
    "cran"
  ],
  "_indexurl": "https://knudson1.r-universe.dev/glmm",
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.4.5",
      "date": "2026-06-07T09:13:10.000Z",
      "distro": "noble",
      "arch": "aarch64",
      "commit": "ebacdba823202779784d2b8bc4cb9130956cf484",
      "fileid": "0ec94baeb1a0a94be991d9cfef8432fd58af525d134489ae64d744230d447d0e",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/27088212517"
    },
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.4.5",
      "date": "2026-06-07T09:12:46.000Z",
      "distro": "noble",
      "arch": "x86_64",
      "commit": "ebacdba823202779784d2b8bc4cb9130956cf484",
      "fileid": "f96e69cb3c0b2fa6b791f1cf4428e67e05eda8bb192b7f6cac6421891692f120",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/27088212517"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "1.4.5",
      "date": "2026-06-07T09:13:09.000Z",
      "distro": "noble",
      "arch": "aarch64",
      "commit": "ebacdba823202779784d2b8bc4cb9130956cf484",
      "fileid": "9079f701c2f0adacb7abc52893d6ffed52a0e2a2455f9774de5422d4c70c3558",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/27088212517"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "1.4.5",
      "date": "2026-06-07T09:12:58.000Z",
      "distro": "noble",
      "arch": "x86_64",
      "commit": "ebacdba823202779784d2b8bc4cb9130956cf484",
      "fileid": "311e34b7af8e6c2a3de60d1da900a28c94d836aa3ef8744a1852e6067e1eaeb0",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/27088212517"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.4.5",
      "date": "2026-06-07T09:13:04.000Z",
      "arch": "emscripten",
      "commit": "ebacdba823202779784d2b8bc4cb9130956cf484",
      "fileid": "094e72e4c54376f5509bf73fe3742d59982775e8e640be4cf958b6bca0c9ab78",
      "status": "success",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/27088212517"
    }
  ]
}