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  "Title": "Generalized Competing Event Models with Lunn-McNeil Testing",
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  "Date": "2026-09-02",
  "Authors@R": "person(\"Loren\", \"Mell\", email = \"lmell@ucsd.edu\", role = c(\"aut\", \"cre\"))",
  "Description": "Fits generalized competing event (GCE) models and\nestimates covariate effects on omega-plus, the ratio of the\nhazard for an event of interest to the hazard for a competing\nevent, on both the cause-specific (Cox) and subdistribution\n(Fine-Gray) hazard scales. Confidence intervals and p-values\nare obtained from the Lunn-McNeil (1995) stacked (augmented)\ndata approach. The package builds GCE risk scores from the\nmodel linear predictor, identifies risk-score cutpoints that\nmaximize the separation in omega-plus between groups, and\nproduces cumulative incidence (\"alligator\") plots by risk group\nand calibration plots of predicted versus observed omega-plus.\nIt also compares covariate effects across the primary,\ncompeting, and total (composite) events, and estimates\ncovariate effects on the ratio of cumulative incidence\nfunctions (a cumulative-incidence-scale GCE model). Methods\nfollow Carmona et al. (2014)\n<doi:10.1016/j.ijrobp.2014.03.047>, Mell et al. (2024)\n<doi:10.1016/j.eururo.2023.01.020>, and Lunn and McNeil (1995)\n<doi:10.2307/2532940>.",
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  "Author": "Loren Mell [aut, cre]",
  "Maintainer": "Loren Mell <lmell@ucsd.edu>",
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        "t_cat",
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    {
      "page": "gce_alligator",
      "title": "Alligator plot: cumulative incidence by risk group and event type",
      "topics": [
        "gce_alligator"
      ]
    },
    {
      "page": "gce_calibration",
      "title": "Calibration of predicted vs. observed omega+ by risk rank",
      "topics": [
        "gce_calibration"
      ]
    },
    {
      "page": "gce_cutpoints",
      "title": "Risk-score cutpoints for GCE risk stratification",
      "topics": [
        "gce_cutpoints"
      ]
    },
    {
      "page": "gce_performance",
      "title": "Discrimination (C-index) for a GCE model",
      "topics": [
        "gce_performance"
      ]
    },
    {
      "page": "gce_riskscore",
      "title": "Normalized risk score and relative omega+ for new subjects",
      "topics": [
        "gce_riskscore"
      ]
    },
    {
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      "title": "Generalized competing event model via cause-specific Cox regression",
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      "title": "Generalized competing event model via Fine-Gray regression",
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      "title": "Head-and-neck cancer competing-risks example dataset",
      "topics": [
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    },
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      "title": "Prostate cancer competing-risks example dataset",
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      ]
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