{ "_id": "6ad726aa0d12c08e591b84c6", "Package": "fmriAR", "Type": "Package", "Title": "Fast AR and ARMA Noise Whitening for Functional MRI (fMRI)\nDesign and Data", "Version": "0.3.2", "Authors@R": "person(\"Bradley\", \"Buchsbaum\", email = \"brad.buchsbaum@gmail.com\", role = c(\"aut\",\"cre\"))", "Author": "Bradley Buchsbaum [aut, cre]", "Maintainer": "Bradley Buchsbaum ", "Description": "Lightweight utilities to estimate autoregressive (AR) and\nautoregressive moving average (ARMA) noise models from\nresiduals and apply matched generalized least squares to whiten\nfunctional magnetic resonance imaging (fMRI) design and data\nmatrices. The ARMA estimator follows a classic 1982 approach\n, and a restricted AR family\nmirrors workflows described by Cox (2012)\n.", "License": "MIT + file LICENSE", "Encoding": "UTF-8", "RoxygenNote": "7.3.3", "SystemRequirements": "OpenMP (optional)", "Config/testthat/edition": "3", "VignetteBuilder": "knitr", "URL": "https://bbuchsbaum.github.io/fmriAR/", "NeedsCompilation": "yes", "Packaged": { "Date": "2026-10-20 08:26:00 UTC", "User": "root" }, "Repository": "https://cran.r-universe.dev", "Date/Publication": "2026-04-15 15:41:46 UTC", "RemoteUrl": "https://github.com/cran/fmriAR", "RemoteRef": "HEAD", "RemoteSha": "62840588d0be62a9a7d95ca41f4d771a92832748", "_user": "cran", "_type": "src", "_file": "fmriAR_0.3.2.tar.gz", "_fileid": "https://r2.ropensci.org/4a54e7fe559b8bd58241911e2928980d85e17c6bf4bd58ab56e4f4b69cc37df2", "_filesize": 286746, "_sha256": "4a54e7fe559b8bd58241911e2928980d85e17c6bf4bd58ab56e4f4b69cc37df2", "_expires": "2027-01-28T08:30:32.000Z", "_created": "2026-10-20T08:26:00.000Z", "_published": "2026-10-20T08:30:34.463Z", "_upstream": "https://github.com/cran/fmriAR", "_status": "success", "_maintainer": { "name": "Bradley Buchsbaum", "email": "brad.buchsbaum@gmail.com", "login": "bbuchsbaum", "description": "", "uuid": 53819 }, "_jobs": [ { "job": 118530227304, "time": 118, "config": "linux-devel-arm64", "r": "4.7.0", "check": "OK", "artifact": "12249909882" }, { "job": 118530227337, "time": 123, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "12250597131" }, { "job": 118530227328, "time": 99, "config": "linux-release-arm64", "r": "4.6.1", "check": "OK", "artifact": "12251250065" }, { "job": 118530227427, "time": 109, "config": "linux-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "12250975782" }, { "job": 118528600715, "time": 242, "config": "source", "r": "4.6.1", "check": "OK", "artifact": "12250771430" }, { "job": 118530227149, "time": 97, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "12249864723" }, { "job": 118530227275, "time": 209, "config": "windows-devel-arm64", "r": "4.7.0", "check": "OK", "artifact": "12251085728" }, { "job": 118530227316, "time": 160, "config": "windows-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "12250194072" }, { "job": 118530227354, "time": 212, "config": "windows-release-arm64", "r": "4.6.1", "check": "OK", "artifact": "12250507422" }, { "job": 118530227306, "time": 133, "config": "windows-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "12250841245" } ], "_buildurl": "https://github.com/r-universe/cran/actions/runs/39392899583", "_commit": { "id": "62840588d0be62a9a7d95ca41f4d771a92832748", "author": "Bradley Buchsbaum ", "committer": "cran-robot ", "message": "version 0.3.2\n", "time": 1776267706 }, "_distro": "resolute", "_host": "GitHub-Actions", "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 4.0", "role": "Depends" }, { "package": "Rcpp", "role": "LinkingTo" }, { "package": "RcppArmadillo", "role": "LinkingTo" }, { "package": "Rcpp", "role": "Imports" }, { "package": "stats", "role": "Imports" }, { "package": "testthat", "version": ">= 3.0.0", "role": "Suggests" }, { "package": "knitr", "role": "Suggests" }, { "package": "rmarkdown", "role": "Suggests" }, { "package": "abind", "role": "Suggests" }, { "package": "withr", "role": "Suggests" } ], "_owner": "cran", "_selfowned": false, "_usedby": 3, "_updates": [ { "week": "2025-45", "n": 1 }, { "week": "2026-04", "n": 1 }, { "week": "2026-16", "n": 1 } ], "_tags": [ { "name": "0.2.0", "date": "2025-11-03" }, { "name": "0.3.1", "date": "2026-01-25" }, { "name": "0.3.2", "date": "2026-04-15" } ], "_stars": 0, "_contributors": [ { "user": "bbuchsbaum", "count": 3, "uuid": 53819 } ], "_userbio": { "uuid": 6899542, "type": "organization", "name": "cran", "followers": 634, "description": "Unofficial read-only mirror of all CRAN R packages" }, "_downloads": { "count": 475, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/fmriAR" }, "_devurl": "https://github.com/bbuchsbaum/fmriar", "_pkgdown": "https://bbuchsbaum.github.io/fmriAR/", "_searchresults": 9, "_topics": [ "openblas", "cpp" ], "_rbuild": "4.6.1", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/fmriAR.html", "extra/manual.pdf", "extra/NEWS.html", "extra/NEWS.txt", "extra/readme.html", "extra/readme.md", "LICENSE" ], "_homeurl": "https://github.com/bbuchsbaum/fmriar", "_realowner": "bbuchsbaum", "_cranurl": false, "_releases": [ { "version": "0.2.0", "date": "2025-11-03" }, { "version": "0.3.1", "date": "2026-01-25" }, { "version": "0.3.2", "date": "2026-04-15" } ], "_exports": [ "acorr_diagnostics", "afni_restricted_plan", "compat", "fit_noise", "sandwich_from_whitened_resid", "whiten", "whiten_apply" ], "_help": [ { "page": "acorr_diagnostics", "title": "Autocorrelation diagnostics for residuals", "topics": [ "acorr_diagnostics" ] }, { "page": "afni_restricted_plan", "title": "Build an AFNI-style restricted AR plan from root parameters", "topics": [ "afni_restricted_plan" ] }, { "page": "fit_noise", "title": "Fit an AR/ARMA noise model (run-aware) and return a whitening plan", "topics": [ "fit_noise" ] }, { "page": "print.fmriAR_plan", "title": "Pretty-print an fmriAR whitening plan", "topics": [ "print.fmriAR_plan" ] }, { "page": "sandwich_from_whitened_resid", "title": "GLS standard errors from whitened residuals", "topics": [ "sandwich_from_whitened_resid" ] }, { "page": "whiten", "title": "Fit and apply whitening in one call", "topics": [ "whiten" ] }, { "page": "whiten_apply", "title": "Apply a whitening plan to design and data matrices", "topics": [ "whiten_apply" ] } ], "_readme": "https://github.com/cran/fmriAR/raw/HEAD/README.md", "_rundeps": [ "Rcpp", "RcppArmadillo" ], "_sysdeps": [ { "shlib": "liblapack", "package": "libopenblas0-pthread", "source": "openblas", "version": "0.3.32+ds-5", "name": "openblas", "homepage": "https://www.openblas.net/", "description": "Optimized BLAS (linear algebra) library (shared lib, pthread)" }, { "shlib": "libstdc++", "package": "libstdc++6", "source": "gcc", "version": "16-20260322-1ubuntu1", "name": "c++", "homepage": "http://gcc.gnu.org/", "description": "GNU Standard C++ Library v3" } ], "_vignettes": [ { "source": "fmriAR-introduction.Rmd", "filename": "fmriAR-introduction.html", "title": "Getting Started with fmriAR", "author": "fmriAR Team", "engine": "knitr::rmarkdown", "headings": [ "Overview", "Simulating data for the examples", "Fitting an AR model", "Whitening design and data matrices", "Inspecting innovations", "Parcel pooling and multiscale shrinkage", "Fitting ARMA models", "AFNI-style restricted AR filters", "Diagnostics and sandwich estimates", "Next steps" ], "created": "2025-11-03 10:10:02", "modified": "2026-01-25 22:30:02", "commits": 2 } ], "_score": 4.1303337684950066, "_indexed": false, "_nocasepkg": "fmriar", "_universes": [ "cran" ], "_indexurl": "https://bbuchsbaum.r-universe.dev/fmriAR", "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "0.3.2", "date": "2026-10-20T08:28:12.000Z", "distro": "resolute", "arch": "aarch64", "commit": "62840588d0be62a9a7d95ca41f4d771a92832748", "fileid": "https://r2.ropensci.org/40965d9893e2701d6bf3a11a4928af5ba5391728911619648ad359ae93ae258c", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/39392899583" }, { "r": "4.7.0", "os": "linux", "version": "0.3.2", "date": "2026-10-20T08:28:12.000Z", "distro": "resolute", "arch": "x86_64", "commit": "62840588d0be62a9a7d95ca41f4d771a92832748", "fileid": "https://r2.ropensci.org/0cc975698ab95b42f5dff93a419d365a2dd95dd58934cc4d884cd17252647638", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/39392899583" }, { "r": "4.6.1", "os": "linux", "version": "0.3.2", "date": "2026-10-20T08:27:50.000Z", "distro": "resolute", "arch": "aarch64", "commit": "62840588d0be62a9a7d95ca41f4d771a92832748", "fileid": "https://r2.ropensci.org/30a2b4d36f9f8a02ef66448f6c5c21fc724142117cee6036bf1ec72598311ead", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/39392899583" }, { "r": "4.6.1", "os": "linux", "version": "0.3.2", "date": "2026-10-20T08:28:02.000Z", "distro": "resolute", "arch": "x86_64", "commit": "62840588d0be62a9a7d95ca41f4d771a92832748", "fileid": "https://r2.ropensci.org/edf34f72b7b29ad3f16fd782bf8f14347976c3e74290a5c1e05d744e79d34f4e", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/39392899583" }, { "r": "4.6.0", "os": "wasm", "version": "0.3.2", "date": "2026-10-20T08:28:04.000Z", "arch": "emscripten", "commit": "62840588d0be62a9a7d95ca41f4d771a92832748", "fileid": "https://r2.ropensci.org/17ad7b5809e74e1fa9b45c04c18d27ccc35dc7d057747199aa31f63052638e47", "status": "success", "buildurl": "https://github.com/r-universe/cran/actions/runs/39392899583" }, { "r": "4.7.0", "os": "win", "version": "0.3.2", "date": "2026-10-20T08:29:14.000Z", "arch": "aarch64", "commit": "62840588d0be62a9a7d95ca41f4d771a92832748", "fileid": "https://r2.ropensci.org/d5fa6e7821ef0be1dfca1fc92065aebcaaa77066c549bad6d9d2e6eec83ffbe9", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/39392899583" }, { "r": "4.7.0", "os": "win", "version": "0.3.2", "date": "2026-10-20T08:27:27.000Z", "arch": "x86_64", "commit": "62840588d0be62a9a7d95ca41f4d771a92832748", "fileid": "https://r2.ropensci.org/9fa79ebacc220000aa55315e50dc404d2f96ac352583682dc82313fd3e81de1f", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/39392899583" }, { "r": "4.6.1", "os": "win", "version": "0.3.2", "date": "2026-10-20T08:29:21.000Z", "arch": "aarch64", "commit": "62840588d0be62a9a7d95ca41f4d771a92832748", "fileid": "https://r2.ropensci.org/e6c448010d67864e976a013a731063b83278f9234fedcafeda1ac200e0eda168", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/39392899583" }, { "r": "4.6.1", "os": "win", "version": "0.3.2", "date": "2026-10-20T08:27:38.000Z", "arch": "x86_64", "commit": "62840588d0be62a9a7d95ca41f4d771a92832748", "fileid": "https://r2.ropensci.org/d747be69a5407109228cb55fd84ead0370a6da8c7bf6ce33a56f812c27af78e0", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/39392899583" } ] }