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    "r2",
    "random_pibble_init",
    "reapply_coord",
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    "SE",
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    "summarise_posterior",
    "to_alr",
    "to_clr",
    "to_ilr",
    "to_proportions",
    "uncollapsePibble",
    "uncollapsePibble_sigmaKnown",
    "verify"
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      "tojson": true
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      "page": "alr",
      "title": "Compute the ALR of a matrix",
      "topics": [
        "alr"
      ]
    },
    {
      "page": "alr_array",
      "title": "Compute the ALR of an array",
      "topics": [
        "alr_array"
      ]
    },
    {
      "page": "alrInv",
      "title": "Compute the inverse ALR of a matrix",
      "topics": [
        "alrInv"
      ]
    },
    {
      "page": "alrInv_array",
      "title": "Compute the ALR of an array",
      "topics": [
        "alrInv_array"
      ]
    },
    {
      "page": "as.list.orthusfit",
      "title": "Convert object of class orthusfit to a list",
      "topics": [
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    },
    {
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      "title": "Convert object of class pibblefit to a list",
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    },
    {
      "page": "as.orthusfit",
      "title": "convert list to orthusfit",
      "topics": [
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    {
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      "title": "convert list to pibblefit",
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      "title": "Interface to fit basset models",
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        "basset_fit",
        "refit.bassetfit"
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      "topics": [
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    },
    {
      "page": "clr_array",
      "title": "Compute the CLR of an array",
      "topics": [
        "clr_array"
      ]
    },
    {
      "page": "coef.orthusfit",
      "title": "Return regression coefficients of orthus object",
      "topics": [
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    },
    {
      "page": "coef.pibblefit",
      "title": "Return regression coefficients of pibblefit object",
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      "title": "Solve Bayesian Multivariate Conjugate Linear Model",
      "topics": [
        "conjugateLinearModel"
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      "page": "convert_orthus_covariance",
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      "topics": [
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        "oalrvar2alrvar",
        "oalrvar2clrvar",
        "oalrvar2ilrvar",
        "oclrvar2alrvar",
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        "oilrvar2alrvar",
        "oilrvar2clrvar",
        "oilrvar2ilrvar"
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      "page": "fido_build_info",
      "title": "Report fido native build and runtime information",
      "topics": [
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    },
    {
      "page": "fido_package",
      "title": "fido: Fitting and Analysis of Multinomial Logistic Normal Models",
      "topics": [
        "fido-package",
        "fido",
        "fido_package"
      ]
    },
    {
      "page": "fido_transforms",
      "title": "Transform Fit fido Parameters to other representations",
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