{ "_id": "6a2d15693efcd9bda42f2afa", "Package": "coxphf", "Version": "1.13.4", "Date": "2023-08-09", "Title": "Cox Regression with Firth's Penalized Likelihood", "Authors@R": "c(person(\"Georg\", \"Heinze\", role=c(\"aut\", \"cre\"), email=\"georg.heinze@meduniwien.ac.at\"),\nperson(\"Meinhard\", \"Ploner\", role=c(\"aut\")),\nperson(\"Lena\", \"Jiricka\", role=c(\"aut\")),\nperson(\"Gregor\", \"Steiner\", role=c(\"aut\")))", "Description": "Implements Firth's penalized maximum likelihood bias\nreduction method for Cox regression which has been shown to\nprovide a solution in case of monotone likelihood\n(nonconvergence of likelihood function), see Heinze and\nSchemper (2001) and Heinze and Dunkler (2008). The program fits\nprofile penalized likelihood confidence intervals which were\nproved to outperform Wald confidence intervals.", "License": "GPL", "URL": "https://cemsiis.meduniwien.ac.at/kb/wf/software/statistische-software/fccoxphf/", "RoxygenNote": "7.2.2", "LazyData": "true", "BugReports": "https://github.com/georgheinze/coxphf/issues/", "NeedsCompilation": "yes", "Packaged": { "Date": "2026-06-13 08:28:31 UTC", "User": "root" }, "Author": "Georg Heinze [aut, cre], Meinhard Ploner [aut], Lena Jiricka\n[aut], Gregor Steiner [aut]", "Maintainer": "Georg Heinze ", "Repository": "https://cran.r-universe.dev", "Date/Publication": "2023-08-11 13:30:43 UTC", "RemoteUrl": "https://github.com/cran/coxphf", "RemoteRef": "HEAD", "RemoteSha": "e03ee72be0dc4ee826b8a3c481aa3708f417c483", "MD5sum": "4637c6fca6441e0eff4bb925c817b0f0", "_user": "cran", "_type": "src", "_file": "coxphf_1.13.4.tar.gz", "_fileid": "33336f8a33d48a5cb2712f8b6e04ba1c9067fa52bc3abdc9b9773fa15533e728", "_filesize": 172495, "_sha256": "33336f8a33d48a5cb2712f8b6e04ba1c9067fa52bc3abdc9b9773fa15533e728", "_created": "2026-06-13T08:28:31.000Z", "_published": "2026-06-13T08:31:37.009Z", "_distro": "noble", "_jobs": [ { "job": 81176532850, "time": 127, "config": "linux-devel-arm64", "r": "4.7.0", "check": "OK", "artifact": "7609115565" }, { "job": 81176532819, "time": 115, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "7609113958" }, { "job": 81176532825, "time": 130, "config": "linux-release-arm64", "r": "4.6.0", "check": "OK", "artifact": "7609115976" }, { "job": 81176532823, "time": 115, "config": "linux-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "7609114045" }, { "job": 81176350818, "time": 193, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7609100241" }, { "job": 81176532806, "time": 103, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7609113194" } ], "_buildurl": "https://github.com/r-universe/cran/actions/runs/27461591889", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/cran/coxphf", "_commit": { "id": "e03ee72be0dc4ee826b8a3c481aa3708f417c483", "author": "Georg Heinze ", "committer": "cran-robot ", "message": "version 1.13.4\n", "time": 1691760643 }, "_maintainer": { "name": "Georg Heinze", "email": "georg.heinze@meduniwien.ac.at", "login": "georgheinze", "description": "Biostatistician and prognosis researcher @ Medical University of Vienna", "uuid": 56126472 }, "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 4.1.0", "role": "Depends" }, { "package": "survival", "role": "Imports" }, { "package": "generics", "role": "Imports" }, { "package": "tibble", "role": "Imports" } ], "_owner": "cran", "_selfowned": false, "_usedby": 1, "_updates": [], "_tags": [], "_stars": 1, "_contributors": [ { "user": "georgheinze", "count": 11, "uuid": 56126472 } ], "_userbio": { "uuid": 6899542, "type": "organization", "name": "cran", "description": "Unofficial read-only mirror of all CRAN R packages" }, "_downloads": { "count": 1424, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/coxphf" }, "_mentions": 16, "_devurl": "https://github.com/georgheinze/coxphf", "_searchresults": 75, "_topics": [ "fortran" ], "_rbuild": "4.6.0", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/coxphf.html", "extra/readme.html", "extra/readme.md", "manual.pdf" ], "_homeurl": "https://github.com/georgheinze/coxphf", "_realowner": "georgheinze", "_cranurl": false, "_releases": [ { "version": "1.0-2", "date": "2007-04-11" }, { "version": "1.05", "date": "2010-04-22" }, { "version": "1.08", "date": "2011-10-27" }, { "version": "1.09", "date": "2012-09-14" }, { "version": "1.10", "date": "2013-07-08" }, { "version": "1.11", "date": "2015-01-21" }, { "version": "1.12", "date": "2016-12-22" }, { "version": "1.13", "date": "2018-03-03" }, { "version": "1.13.1", "date": "2020-09-28" }, { "version": "1.13.3", "date": "2023-07-18" }, { "version": "1.13.4", "date": "2023-08-11" } ], "_exports": [ "augment.coxphf", "coxphf", "coxphfplot", "coxphftest", "glance", "tidy.coxphf" ], "_datasets": [ { "name": "breast", "title": "Breast Cancer Data Set", "object": "breast", "class": [ "data.frame" ], "fields": [ "T", "N", "G", "CD", "TIME", "CENS" ], "rows": 100, "table": true, "tojson": true } ], "_help": [ { "page": "coxphf-package", "title": "Cox Regression with Firth's Penalized Likelihood", "topics": [ "coxphf-package", "_PACKAGE" ] }, { "page": "augment.coxphf", "title": "Augment a coxphf object", "topics": [ "augment.coxphf" ] }, { "page": "breast", "title": "Breast Cancer Data Set", "topics": [ "breast" ] }, { "page": "coxphf", "title": "Cox Regression with Firth's Penalized Likelihood", "topics": [ "coxphf" ] }, { "page": "coxphfplot", "title": "Plot the Penalized Profile Likelhood Function", "topics": [ "coxphfplot" ] }, { "page": "coxphftest", "title": "Penalized Likelihood Ratio Test in Cox Regression", "topics": [ "coxphftest" ] }, { "page": "glance.coxphf", "title": "Glance at a coxphf object", "topics": [ "glance.coxphf" ] }, { "page": "tidy.coxphf", "title": "Tidy a coxphf object", "topics": [ "tidy.coxphf" ] } ], "_readme": "https://github.com/cran/coxphf/raw/HEAD/README.md", "_rundeps": [ "cli", "generics", "glue", "lattice", "lifecycle", "magrittr", "Matrix", "pillar", "pkgconfig", "rlang", "survival", "tibble", "utf8", "vctrs" ], "_sysdeps": [ { "shlib": "libgfortran", "package": "libgfortran5", "source": "gcc", "version": "14.2.0-4ubuntu2~24.04.1", "name": "fortran", "homepage": "http://gcc.gnu.org/", "description": "Runtime library for GNU Fortran applications" } ], "_score": 4.204662511748219, "_indexed": false, "_nocasepkg": "coxphf", "_universes": [ "cran" ], "_indexurl": "https://georgheinze.r-universe.dev/coxphf", "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.13.4", "date": "2026-06-13T08:30:54.000Z", "distro": "noble", "arch": "aarch64", "commit": "e03ee72be0dc4ee826b8a3c481aa3708f417c483", "fileid": "42ad59065c51da667b0201da5bb7004f0ba87a82eca0670b71c36e37a5c1de1e", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/27461591889" }, { "r": "4.7.0", "os": "linux", "version": "1.13.4", "date": "2026-06-13T08:30:36.000Z", "distro": "noble", "arch": "x86_64", "commit": "e03ee72be0dc4ee826b8a3c481aa3708f417c483", "fileid": "626ead41cd03a9ed15ba488e02374af391d645db663f8e6cf4a863faa850755f", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/27461591889" }, { "r": "4.6.0", "os": "linux", "version": "1.13.4", "date": "2026-06-13T08:30:56.000Z", "distro": "noble", "arch": "aarch64", "commit": "e03ee72be0dc4ee826b8a3c481aa3708f417c483", "fileid": "80ed6c4f7704c25b23b7e6d40c6dbda187867e2e01843772ad9e1b8a9ec85182", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/27461591889" }, { "r": "4.6.0", "os": "linux", "version": "1.13.4", "date": "2026-06-13T08:30:36.000Z", "distro": "noble", "arch": "x86_64", "commit": "e03ee72be0dc4ee826b8a3c481aa3708f417c483", "fileid": "9982bf93d531e5419294227fe316801e84e7b49af650bdf92924b9bf7bef4cc2", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/27461591889" }, { "r": "4.6.0", "os": "wasm", "version": "1.13.4", "date": "2026-06-13T08:30:52.000Z", "arch": "emscripten", "commit": "e03ee72be0dc4ee826b8a3c481aa3708f417c483", "fileid": "b5478f4134bb71d3f561e033e51e0ae5328343dcece01e1f12a7ab7fde66efa5", "status": "success", "buildurl": "https://github.com/r-universe/cran/actions/runs/27461591889" } ] }