{
  "_id": "6a1ffccdb401979e73444c26",
  "Package": "countdata",
  "Type": "Package",
  "Title": "The Beta-Binomial Test for Count Data",
  "Version": "1.3",
  "Date": "2023-03-09",
  "Authors@R": "c(person(\"Thang\", \"Pham\", email = \"t.pham@amsterdamumc.nl\",\nrole = c(\"aut\", \"cre\", \"cph\", \"ctb\"),\ncomment = c(ORCID = \"0000-0003-0333-2492\")))",
  "Maintainer": "Thang Pham <t.pham@amsterdamumc.nl>",
  "Description": "The beta-binomial test is used for significance analysis\nof independent samples by Pham et al. (2010)\n<doi:10.1093/bioinformatics/btp677>. The inverted beta-binomial\ntest is used for paired sample testing, e.g. pre-treatment and\npost-treatment data, by Pham and Jimenez (2012)\n<doi:10.1093/bioinformatics/bts394>.",
  "License": "BSD_3_clause + file LICENSE",
  "Encoding": "UTF-8",
  "VignetteBuilder": "knitr",
  "NeedsCompilation": "yes",
  "Packaged": {
    "Date": "2026-06-03 10:04:08 UTC",
    "User": "root"
  },
  "Author": "Thang Pham [aut, cre, cph, ctb]\n(<https://orcid.org/0000-0003-0333-2492>)",
  "Repository": "https://cran.r-universe.dev",
  "Date/Publication": "2023-03-09 10:10:02 UTC",
  "RemoteUrl": "https://github.com/cran/countdata",
  "RemoteRef": "HEAD",
  "RemoteSha": "6157e6ce4f6e9b5e2a487f328178564efbf65676",
  "MD5sum": "ec15839e110432ad3572cee06538e2d9",
  "_user": "cran",
  "_type": "src",
  "_file": "countdata_1.3.tar.gz",
  "_fileid": "643778bdc0ab846cc09cb93b1972c4771ce841f585083e72be5ace0ce200bd6b",
  "_filesize": 711520,
  "_sha256": "643778bdc0ab846cc09cb93b1972c4771ce841f585083e72be5ace0ce200bd6b",
  "_created": "2026-06-03T10:04:08.000Z",
  "_published": "2026-06-03T10:07:09.274Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 79269614222,
      "time": 137,
      "config": "linux-devel-arm64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7381602165"
    },
    {
      "job": 79269614176,
      "time": 108,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7381591007"
    },
    {
      "job": 79269614177,
      "time": 109,
      "config": "linux-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7381592138"
    },
    {
      "job": 79269614260,
      "time": 109,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7381590912"
    },
    {
      "job": 79268997541,
      "time": 211,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7381550407"
    },
    {
      "job": 79269614228,
      "time": 101,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7381588015"
    }
  ],
  "_buildurl": "https://github.com/r-universe/cran/actions/runs/26877414127",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/cran/countdata",
  "_commit": {
    "id": "6157e6ce4f6e9b5e2a487f328178564efbf65676",
    "author": "Thang Pham <t.pham@amsterdamumc.nl>",
    "committer": "cran-robot <csardi.gabor+cran@gmail.com>",
    "message": "version 1.3\n",
    "time": 1678356602
  },
  "_maintainer": {
    "name": "Thang Pham",
    "email": "t.pham@amsterdamumc.nl",
    "orcid": "0000-0003-0333-2492"
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 2.10",
      "role": "Depends"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    }
  ],
  "_owner": "cran",
  "_selfowned": false,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_stars": 0,
  "_userbio": {
    "uuid": 6899542,
    "type": "organization",
    "name": "cran",
    "description": "Unofficial read-only mirror of all CRAN R packages"
  },
  "_downloads": {
    "count": 190,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/countdata"
  },
  "_searchresults": 9,
  "_topics": [
    "openmp"
  ],
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/countdata.html",
    "manual.pdf"
  ],
  "_realowner": "cran",
  "_cranurl": false,
  "_releases": [
    {
      "version": "1.1",
      "date": "2021-01-27"
    },
    {
      "version": "1.2",
      "date": "2021-09-14"
    },
    {
      "version": "1.3",
      "date": "2023-03-09"
    }
  ],
  "_exports": [
    "bb.test",
    "fold.change",
    "ibb.test",
    "normalize"
  ],
  "_help": [
    {
      "page": "bb.test",
      "title": "The beta-binomial test",
      "topics": [
        "bb.test"
      ]
    },
    {
      "page": "fold.change",
      "title": "Fold change calculation",
      "topics": [
        "fold.change"
      ]
    },
    {
      "page": "ibb.test",
      "title": "The inverted beta-binomial test",
      "topics": [
        "ibb.test"
      ]
    },
    {
      "page": "normalize",
      "title": "Global normalization of count data",
      "topics": [
        "normalize"
      ]
    }
  ],
  "_rundeps": [],
  "_sysdeps": [
    {
      "shlib": "libgomp",
      "package": "libgomp1",
      "source": "gcc",
      "version": "14.2.0-4ubuntu2~24.04.1",
      "name": "openmp",
      "homepage": "http://gcc.gnu.org/",
      "description": "GCC OpenMP (GOMP) support library"
    }
  ],
  "_vignettes": [
    {
      "source": "countdata.Rmd",
      "filename": "countdata.html",
      "title": "The Beta-Binomial Test for Count Data",
      "author": "Thang V Pham",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Quick start",
        "Unpaired test",
        "Data normalization",
        "Fold change calculation",
        "Paired test",
        "References"
      ],
      "created": "2021-01-27 09:00:04",
      "modified": "2021-09-14 18:30:02",
      "commits": 2
    }
  ],
  "_score": 2,
  "_indexed": true,
  "_nocasepkg": "countdata",
  "_universes": [
    "cran"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.3",
      "date": "2026-06-03T10:06:42.000Z",
      "distro": "noble",
      "arch": "aarch64",
      "commit": "6157e6ce4f6e9b5e2a487f328178564efbf65676",
      "fileid": "db44e72ba453013b8876ad053ca85e70c72f7a8f4545476e1670c2ae87d1a9b3",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/26877414127"
    },
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.3",
      "date": "2026-06-03T10:06:07.000Z",
      "distro": "noble",
      "arch": "x86_64",
      "commit": "6157e6ce4f6e9b5e2a487f328178564efbf65676",
      "fileid": "28eaceb6d378541c786ae08b69c27d9d0d6a57cc22fe8f24796f4ddedd60d2a2",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/26877414127"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "1.3",
      "date": "2026-06-03T10:06:12.000Z",
      "distro": "noble",
      "arch": "aarch64",
      "commit": "6157e6ce4f6e9b5e2a487f328178564efbf65676",
      "fileid": "c8e9b89be8e227213f93e3a2e64c38eb75ec0277bc2fb8683429fcd4ef58b1c4",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/26877414127"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "1.3",
      "date": "2026-06-03T10:06:05.000Z",
      "distro": "noble",
      "arch": "x86_64",
      "commit": "6157e6ce4f6e9b5e2a487f328178564efbf65676",
      "fileid": "8fd878c75a93687123bb50868c6c380cfa863d5a8b5873690cde1193f472630c",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/26877414127"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.3",
      "date": "2026-06-03T10:06:09.000Z",
      "arch": "emscripten",
      "commit": "6157e6ce4f6e9b5e2a487f328178564efbf65676",
      "fileid": "08c2b7a02c2a2b675865c02107002f420e5155feae7a24b3139f2bcd42f72034",
      "status": "success",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/26877414127"
    }
  ]
}