{
  "_id": "6a12c139acfb0bcc41d1ddc4",
  "Package": "boinet",
  "Version": "1.5.0",
  "Title": "Conduct Simulation Study of Bayesian Optimal Interval Design\nwith BOIN-ET Family",
  "Authors@R": "c(\nperson(given  = \"Yusuke\",\nfamily = \"Yamaguchi\",\nrole   = c(\"aut\",\"cre\"),\nemail  = \"yamagubed@gmail.com\"),\nperson(given  = \"Kentaro\",\nfamily = \"Takeda\",\nrole   = c(\"aut\")))",
  "Description": "Bayesian optimal interval based on both efficacy and\ntoxicity outcomes (BOIN-ET) design is a model-assisted oncology\nphase I/II trial design, aiming to establish an optimal\nbiological dose accounting for efficacy and toxicity in the\nframework of dose-finding. Some extensions of BOIN-ET design\nare also available to allow for time-to-event efficacy and\ntoxicity outcomes based on cumulative and pending data\n(time-to-event BOIN-ET: TITE-BOIN-ET), ordinal graded efficacy\nand toxicity outcomes (generalized BOIN-ET: gBOIN-ET), and\ntheir combination (TITE-gBOIN-ET). 'boinet' is a package to\nimplement the BOIN-ET design family and supports the conduct of\nsimulation studies to assess operating characteristics of\nBOIN-ET, TITE-BOIN-ET, gBOIN-ET, and TITE-gBOIN-ET, where users\ncan choose design parameters in flexible and straightforward\nways depending on their own application.",
  "License": "MIT + file LICENSE",
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    "Date": "2026-05-24 09:09:24 UTC",
    "User": "root"
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  "Author": "Yusuke Yamaguchi [aut, cre], Kentaro Takeda [aut]",
  "Maintainer": "Yusuke Yamaguchi <yamagubed@gmail.com>",
  "Repository": "https://cran.r-universe.dev",
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    "create_boinet_tables",
    "create_design_gt_table",
    "create_oc_gt_table",
    "extract_boinet_data",
    "extract_design_summary",
    "extract_operating_characteristics",
    "format_boinet_results",
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    "gboinet",
    "gridoptim",
    "launch.shinyapp",
    "multi.iso",
    "obd.select",
    "tite.boinet",
    "tite.gboinet",
    "utility.scoring",
    "utility.truncated.linear",
    "utility.weighted"
  ],
  "_help": [
    {
      "page": "boinet",
      "title": "BOIN-ET: Bayesian Optimal Interval Design for Dose-Finding Based on Efficacy and Toxicity",
      "topics": [
        "boinet"
      ]
    },
    {
      "page": "create_boinet_tables",
      "title": "Create Report-Ready Tables from BOIN-ET Results",
      "topics": [
        "create_boinet_tables"
      ]
    },
    {
      "page": "create_design_gt_table",
      "title": "Create GT Table for Design Parameters",
      "topics": [
        "create_design_gt_table"
      ]
    },
    {
      "page": "create_oc_gt_table",
      "title": "Create GT Table for Operating Characteristics",
      "topics": [
        "create_oc_gt_table"
      ]
    },
    {
      "page": "extract_boinet_data",
      "title": "Extract Tidy Data from BOIN-ET Results",
      "topics": [
        "extract_boinet_data"
      ]
    },
    {
      "page": "extract_design_summary",
      "title": "Extract Design Parameters Summary",
      "topics": [
        "extract_design_summary"
      ]
    },
    {
      "page": "extract_operating_characteristics",
      "title": "Extract Operating Characteristics in Tidy Format",
      "topics": [
        "extract_operating_characteristics"
      ]
    },
    {
      "page": "format_boinet_results",
      "title": "Format BOIN-ET Results for Reporting",
      "topics": [
        "format_boinet_results"
      ]
    },
    {
      "page": "fp.logit",
      "title": "Fractional Polynomial Logistic Regression for Dose-Efficacy Modeling",
      "topics": [
        "fp.logit"
      ]
    },
    {
      "page": "gboinet",
      "title": "gBOIN-ET: Generalized Bayesian Optimal Interval Design for Ordinal Graded Outcomes",
      "topics": [
        "gboinet"
      ]
    },
    {
      "page": "gridoptim",
      "title": "Grid Search Optimization for BOIN-ET Design Boundaries",
      "topics": [
        "gridoptim"
      ]
    },
    {
      "page": "launch.shinyapp",
      "title": "Launch the Shiny App",
      "topics": [
        "launch.shinyapp"
      ]
    },
    {
      "page": "multi.iso",
      "title": "Model Averaging of Multiple Unimodal Isotonic Regression",
      "topics": [
        "multi.iso"
      ]
    },
    {
      "page": "obd.select",
      "title": "Optimal Biological Dose Selection",
      "topics": [
        "obd.select"
      ]
    },
    {
      "page": "print.boinet",
      "title": "Print boinet",
      "topics": [
        "print.boinet"
      ]
    },
    {
      "page": "print.gboinet",
      "title": "Print gboinet",
      "topics": [
        "print.gboinet"
      ]
    },
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      "page": "print.tite.boinet",
      "title": "Print tite.boinet",
      "topics": [
        "print.tite.boinet"
      ]
    },
    {
      "page": "print.tite.gboinet",
      "title": "Print tite.gboinet",
      "topics": [
        "print.tite.gboinet"
      ]
    },
    {
      "page": "summary.boinet",
      "title": "Summary method for boinet objects",
      "topics": [
        "summary.boinet"
      ]
    },
    {
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      "title": "Summary method for gboinet objects",
      "topics": [
        "summary.gboinet"
      ]
    },
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      "title": "Summary method for tite.boinet objects",
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        "summary.tite.boinet"
      ]
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      "title": "Summary method for tite.gboinet objects",
      "topics": [
        "summary.tite.gboinet"
      ]
    },
    {
      "page": "tite.boinet",
      "title": "TITE-BOIN-ET: Time-to-Event Bayesian Optimal Interval Design",
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        "tite.boinet"
      ]
    },
    {
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      "title": "TITE-gBOIN-ET: Time-to-Event Generalized BOIN Design for Ordinal Graded Outcomes",
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        "tite.gboinet"
      ]
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      "title": "Truncated Linear Utility Function for Toxicity-Efficacy Trade-offs",
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        "utility.truncated.linear"
      ]
    },
    {
      "page": "utility.weighted",
      "title": "Weighted Utility Function for Toxicity-Efficacy Trade-off",
      "topics": [
        "utility.weighted"
      ]
    }
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        "Dose Selection Visualization",
        "Risk-Benefit Analysis",
        "Parameterized Reports",
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        "Batch Report Generation",
        "Conditional Content",
        "Best Practices for Quarto Reports",
        "1. Document Structure",
        "2. Chunk Management",
        "3. Reproducible Workflows",
        "4. Output Formatting",
        "Template Library",
        "Clinical Protocol Report Template",
        "Regulatory Submission Template",
        "Troubleshooting Common Issues",
        "Package Availability Issues",
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        "Key Features",
        "Mock Data Setup",
        "Helper Functions for Table Creation",
        "Basic Table Creation",
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